RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 TRMT12Q53H54 448 aaKnown RBP18.57■□□□□ 0.56
COPS7A-218ENST00000543939 PRAMEF8Q5VWM4 474 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 PRAMEF7Q5VXH5 474 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 ANKRD34AQ69YU3 496 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 CDC73Q6P1J9 531 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 GUSBP11Q6P575 273 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 RABEPKQ7Z6M1 372 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 SIMC1Q8NDZ2 872 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 PEX11GQ96HA9 241 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 ZNF300Q96RE9 604 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-218ENST00000543939 ZNF347Q96SE7 839 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 REEP1Q9H902 201 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 BATF3Q9NR55 127 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 SAMHD1Q9Y3Z3 626 aaKnown RBP18.57■□□□□ 0.56
COPS7A-218ENST00000543939 TMEM150CB9EJG8 249 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 H0YIG0 161 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 PLOD3O60568 738 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 NME6O75414 186 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-218ENST00000543939 SERPINB7O75635 380 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 OR2B3O76000 313 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 MSL3P1P0C860 447 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 SLC35E2P0CK97 266 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 ETS2P15036 469 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 ITGA2P17301 1181 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 NT5EP21589 574 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 KCNJ5P48544 419 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 ADARB1P78563 741 aaKnown RBP18.57■□□□□ 0.56
COPS7A-218ENST00000543939 TMEM154Q6P9G4 183 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 CYGBQ8WWM9 190 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 RASSF5Q8WWW0 418 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 MMABQ96EY8 250 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-218ENST00000543939 SLC35A4Q96G79 324 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 COL21A1Q96P44 957 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 EPYCQ99645 322 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 BARD1Q99728 777 aaKnown RBP18.57■□□□□ 0.56
COPS7A-218ENST00000543939 RBCK1Q9BYM8 510 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 MAT2BQ9NZL9 334 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 SCOCQ9UIL1 159 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 LIPT1Q9Y234 373 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 MRPS33Q9Y291 106 aaKnown RBP18.57■□□□□ 0.56
COPS7A-218ENST00000543939 SH3GLB1Q9Y371 365 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 TMEM184BQ9Y519 407 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-218ENST00000543939 VCANP13611 3396 aa18.57■□□□□ 0.56
COPS7A-218ENST00000543939 NCOR1O75376 2440 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 A0A0G2JPF8 293 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 HNRNPCL2B2RXH8 293 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 HNRNPCL3B7ZW38 293 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 H0YAE9 185 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 PCDHGA12O60330 932 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 FESP07332 822 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 HNRNPCL4P0DMR1 293 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 FOLR1P15328 257 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 NELFEP18615 380 aaKnown RBP18.56■□□□□ 0.56
COPS7A-218ENST00000543939 MYF6P23409 242 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 GCGRP47871 477 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 ARHGDIAP52565 204 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 IGLV3-21P80748 117 aaPredicted RBP18.56■□□□□ 0.56
COPS7A-218ENST00000543939 MYBPC1Q00872 1141 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 PUM1Q14671 1186 aaKnown RBP eCLIP18.56■□□□□ 0.56
COPS7A-218ENST00000543939 SYT16Q17RD7 645 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 FAM214AQ32MH5 1076 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 EXOSC6Q5RKV6 272 aaKnown RBP18.56■□□□□ 0.56
COPS7A-218ENST00000543939 PERM1Q5SV97 790 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 OLIG3Q7RTU3 272 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 KRT73Q86Y46 540 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 ZNF595Q8IYB9 648 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 ADAMTS15Q8TE58 950 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 CTHRC1Q96CG8 243 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 AMBRA1Q9C0C7 1298 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 ZNF768Q9H5H4 540 aaKnown RBP18.56■□□□□ 0.56
COPS7A-218ENST00000543939 CUTCQ9NTM9 273 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 GIN1Q9NXP7 522 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 SLC6A14Q9UN76 642 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 PCDHGB3Q9Y5G1 929 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 ENPP4Q9Y6X5 453 aa18.56■□□□□ 0.56
COPS7A-218ENST00000543939 CPED1A4D0V7 1026 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 EME2A4GXA9 379 aaPredicted RBP18.55■□□□□ 0.56
COPS7A-218ENST00000543939 DUXAA6NLW8 204 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 A8MU76 341 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 ADAMDEC1O15204 470 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 CTNSO60931 367 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 DNAJB5O75953 348 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 ALBP02768 609 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 GNAO1P09471 354 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 RRM2P31350 389 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 XCR1P46094 333 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 KCNC4Q03721 635 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 ZNF528Q3MIS6 628 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 GPAT3Q53EU6 434 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 ATAD3BQ5T9A4 648 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 HEPHL1Q6MZM0 1159 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 TMEM71Q6P5X7 295 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 SLC23A3Q6PIS1 610 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 METTL27Q8N6F8 245 aaPredicted RBP18.55■□□□□ 0.56
COPS7A-218ENST00000543939 SLC16A11Q8NCK7 471 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 ZBTB44Q8NCP5 570 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 OR2I1PQ8NGU4 316 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 OR1L3Q8NH93 324 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 DOK4Q8TEW6 326 aa18.55■□□□□ 0.56
COPS7A-218ENST00000543939 TRNT1Q96Q11 434 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms