RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 BADQ92934 168 aa13.75□□□□□ -0.21
GCFC2-211ENST00000541687 SPEF1Q9Y4P9 236 aa13.75□□□□□ -0.21
GCFC2-211ENST00000541687 ZNF646O15015 1829 aaPredicted RBP13.75□□□□□ -0.21
GCFC2-211ENST00000541687 DNAJC13O75165 2243 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 AGAP5A6NIR3 686 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 ZNF879B4DU55 563 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 DBIP07108 87 aaKnown RBP13.74□□□□□ -0.21
GCFC2-211ENST00000541687 NDUFA9Q16795 377 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 ODF4Q2M2E3 257 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 ALG1LQ6GMV1 187 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 SPATC1Q76KD6 591 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 ALDH16A1Q8IZ83 802 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 DNAJC22Q8N4W6 341 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 FRMD6Q96NE9 622 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 RAD9AQ99638 391 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 PRR14Q9BWN1 585 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 ANKHQ9HCJ1 492 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 TM7SF3Q9NS93 570 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 KLHL42Q9P2K6 505 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 DDCP20711 480 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 CERS1P27544 350 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 TMEM53Q6P2H8 277 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 SLC7A5P1Q8MH63 180 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 OR52E4Q8NGH9 312 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 OR52P1PQ8NH57 321 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 ACSL5Q9ULC5 683 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 PCDHGA2Q9Y5H1 932 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 A0A1W2PQL4 384 aaPredicted RBP13.74□□□□□ -0.21
GCFC2-211ENST00000541687 REM1O75628 298 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 ADORA3P0DMS8 318 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 AP2S1P53680 142 aaPredicted RBP13.74□□□□□ -0.21
GCFC2-211ENST00000541687 TAS2R38P59533 333 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 AQP6Q13520 282 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 THOC7Q6I9Y2 204 aaKnown RBP13.74□□□□□ -0.21
GCFC2-211ENST00000541687 ATP6V1C2Q8NEY4 427 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 RHOXF1Q8NHV9 184 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 LRRC20Q8TCA0 184 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 ZNF354BQ96LW1 612 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 MOV10Q9HCE1 1003 aaKnown RBP13.74□□□□□ -0.21
GCFC2-211ENST00000541687 CSNK1G3Q9Y6M4 447 aa13.74□□□□□ -0.21
GCFC2-211ENST00000541687 GRXCR1A8MXD5 290 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 DLGAP1O14490 977 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 PLD2O14939 933 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 HOXB2P14652 356 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 MC3RP41968 323 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 MTNR1AP48039 350 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 NKX3-2P78367 333 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 PRRT3Q5FWE3 981 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 KDM4DQ6B0I6 523 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 KLHL24Q6TFL4 600 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 B3GLCTQ6Y288 498 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 MSRB3Q8IXL7 192 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 NRMQ8IXM6 262 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 NRSN1Q8IZ57 195 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 FAM83FQ8NEG4 500 aaPredicted RBP13.73□□□□□ -0.21
GCFC2-211ENST00000541687 MMP28Q9H239 520 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 PFDN2Q9UHV9 154 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 BMP1P13497 986 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 NPPBP16860 134 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 ACVR1BP36896 505 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 B4GALNT1Q00973 533 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 DUSP7Q16829 419 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 TBC1D25Q3MII6 688 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 LRIF1Q5T3J3 769 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 ZNF776Q68DI1 518 aaPredicted RBP13.73□□□□□ -0.21
GCFC2-211ENST00000541687 SLC9B2Q86UD5 537 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 CHPT1Q8WUD6 406 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 SLC38A5Q8WUX1 472 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 CXorf36Q9H7Y0 433 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 PCDHGA4Q9Y5G9 962 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 TRAV6A0A075B6T7 132 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 ISPDA4D126 451 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 SLC25A12O75746 678 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 IL1RNP18510 177 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 RAB28P51157 221 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 HNRNPA1L2Q32P51 320 aaKnown RBP13.73□□□□□ -0.21
GCFC2-211ENST00000541687 OR2G6Q5TZ20 316 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 ZNF761Q86XN6 746 aaPredicted RBP13.73□□□□□ -0.21
GCFC2-211ENST00000541687 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.73□□□□□ -0.21
GCFC2-211ENST00000541687 PARP16Q8N5Y8 322 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 METTL27Q8N6F8 245 aaPredicted RBP13.73□□□□□ -0.21
GCFC2-211ENST00000541687 BBS10Q8TAM1 723 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 PMEPA1Q969W9 287 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 PTPRFP10586 1907 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 A0A1B0GVC2 190 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 A6NIN4 97 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 GABARAPO95166 117 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 IFNA6P05013 189 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 CYP17A1P05093 508 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 ACVR2AP27037 513 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 HOXC8P31273 242 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 CD97P48960 835 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 VEGFBP49765 207 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 CAV3P56539 151 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 SLC35A2P78381 396 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 GRSF1Q12849 480 aaKnown RBP eCLIP13.73□□□□□ -0.21
GCFC2-211ENST00000541687 FAM214AQ32MH5 1076 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 PRR23CQ6ZRP0 262 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 OR4K14Q8NGD5 310 aa13.73□□□□□ -0.21
GCFC2-211ENST00000541687 OR51L1Q8NGJ5 315 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms