RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 POM121CA8CG34 1229 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 RRP9O43818 475 aaKnown RBP8.46□□□□□ -1.06
YBX3-211ENST00000541351 LDB3O75112 727 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 H2AFYO75367 372 aaKnown RBP8.46□□□□□ -1.06
YBX3-211ENST00000541351 TJP3O95049 919 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 SNUPNO95149 360 aaKnown RBP8.46□□□□□ -1.06
YBX3-211ENST00000541351 PTMAP06454 111 aaKnown RBP8.46□□□□□ -1.06
YBX3-211ENST00000541351 NAGAP17050 411 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 OGNP20774 298 aaKnown RBP8.46□□□□□ -1.06
YBX3-211ENST00000541351 IL11P20809 199 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 COMTP21964 271 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 CLCN7P51798 805 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 CHN2P52757 468 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 AP1S2P56377 157 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 CTBP1Q13363 440 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 PON3Q15166 354 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 SLC18A3Q16572 532 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 SGCBQ16585 318 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 UGT3A1Q6NUS8 523 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 APTXQ7Z2E3 356 aaKnown RBP8.46□□□□□ -1.06
YBX3-211ENST00000541351 UBQLNLQ8IYU4 475 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 C17orf47Q8NEP4 570 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 ADCY4Q8NFM4 1077 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 RDH11Q8TC12 318 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 PIWIL2Q8TC59 973 aaKnown RBP8.46□□□□□ -1.06
YBX3-211ENST00000541351 NEUROG1Q92886 237 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 S100PBPQ96BU1 408 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 ZNF778Q96MU6 729 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 PKP2Q99959 881 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 DHRS9Q9BPW9 319 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 POTEKPQ9BYX7 375 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 REXO4Q9GZR2 422 aaKnown RBP8.46□□□□□ -1.06
YBX3-211ENST00000541351 INTS10Q9NVR2 710 aaKnown RBP8.46□□□□□ -1.06
YBX3-211ENST00000541351 MS4A12Q9NXJ0 267 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 PAQR5Q9NXK6 330 aaPredicted RBP8.46□□□□□ -1.06
YBX3-211ENST00000541351 KCNE2Q9Y6J6 123 aa8.46□□□□□ -1.06
YBX3-211ENST00000541351 LRIT2A6NDA9 550 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 ANKDD1BA6NHY2 528 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 VWC2LB2RUY7 222 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 SMAD9O15198 467 aaKnown RBP8.45□□□□□ -1.06
YBX3-211ENST00000541351 METTL18O95568 372 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 ARAFP10398 606 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 TLX1P31314 330 aaPredicted RBP8.45□□□□□ -1.06
YBX3-211ENST00000541351 FDFT1P37268 417 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 ARFIP2P53365 341 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 PLA2G16P53816 162 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 DVL1P1P54792 670 aaPredicted RBP8.45□□□□□ -1.06
YBX3-211ENST00000541351 C21orf58P58505 322 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 ZBED6P86452 979 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 DOC2AQ14183 400 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 GUSBP1Q15486 140 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 SPRED3Q2MJR0 410 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 DEPDC1Q5TB30 811 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 C6orf163Q5TEZ5 329 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 GTF2IRD2BQ6EKJ0 949 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 C11orf71Q6IPW1 123 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 ZNF544Q6NX49 715 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 NUP54Q7Z3B4 507 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 TBC1D1Q86TI0 1168 aaPredicted RBP8.45□□□□□ -1.06
YBX3-211ENST00000541351 GTF2IRD2Q86UP8 949 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 PLCZ1Q86YW0 608 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 ST13P4Q8IZP2 240 aaPredicted RBP8.45□□□□□ -1.06
YBX3-211ENST00000541351 KRT78Q8N1N4 520 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 ANKRD53Q8N9V6 530 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 TRIM58Q8NG06 486 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 FNDC9Q8TBE3 224 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 FIG4Q92562 907 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 MUCL1Q96DR8 90 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 MS4A6EQ96DS6 147 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 KCNC2Q96PR1 638 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 CSF3RQ99062 836 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 TRMOQ9BU70 441 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 PITHD1Q9GZP4 211 aaPredicted RBP8.45□□□□□ -1.06
YBX3-211ENST00000541351 IL22Q9GZX6 179 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 ANO10Q9NW15 660 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 MOCS1Q9NZB8 636 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 XPR1Q9UBH6 696 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 NENFQ9UMX5 172 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 USP22Q9UPT9 525 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 PDE10AQ9Y233 779 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 DHRS7Q9Y394 339 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 GRIP1Q9Y3R0 1128 aa8.45□□□□□ -1.06
YBX3-211ENST00000541351 PRKDCP78527 4128 aaKnown RBP8.44□□□□□ -1.06
YBX3-211ENST00000541351 A0A0G2JN53 185 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 MYOCOSA0A1B0GUC4 107 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 PJA2O43164 708 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 ICOSLGO75144 302 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 CLEC3AO75596 197 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 ALOX15P16050 662 aaPredicted RBP8.44□□□□□ -1.06
YBX3-211ENST00000541351 FABP6P51161 128 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 SLC37A1P57057 533 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 HERVK_113P63132 956 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 ERVK-8P63133 956 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 IGLV3-21P80748 117 aaPredicted RBP8.44□□□□□ -1.06
YBX3-211ENST00000541351 CUL1Q13616 776 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 ZNF267Q14586 743 aaPredicted RBP8.44□□□□□ -1.06
YBX3-211ENST00000541351 TAB1Q15750 504 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 CARTPTQ16568 116 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 FIGNL1Q6PIW4 674 aa8.44□□□□□ -1.06
YBX3-211ENST00000541351 TMEM108Q6UXF1 575 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms