RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 GPR19Q15760 415 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 TMEM52BQ4KMG9 183 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 CCDC92Q53HC0 331 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 C3orf38Q5JPI3 329 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 OR2G6Q5TZ20 316 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 KIAA1211LQ6NV74 962 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ZNF544Q6NX49 715 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 TMPRSS11AQ6ZMR5 421 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 QSOX2Q6ZRP7 698 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ERN2Q76MJ5 926 aaKnown RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 MRPL43Q8N983 215 aaKnown RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 OR4K5Q8NGD3 323 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 OR5K2Q8NHB8 316 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 EXOSC8Q96B26 276 aaKnown RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 OTUB1Q96FW1 271 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 SNX18Q96RF0 628 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 NELL2Q99435 816 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 KATNB1Q9BVA0 655 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 LGR4Q9BXB1 951 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 RNF208Q9H0X6 261 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 NT5DC2Q9H857 520 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 KCNK12Q9HB15 430 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 TIGARQ9NQ88 270 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 TVP23BQ9NYZ1 205 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 CXXC1Q9P0U4 656 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 SLC27A6Q9Y2P4 619 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 KCNE3Q9Y6H6 103 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 TLX2O43763 284 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 CDRT1O95170 752 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 HLA-DQB1P01920 261 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ADRB3P13945 408 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 XPAP23025 273 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 KELP23276 732 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 FCARP24071 287 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 PSMA1P25786 263 aaKnown RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 GPR1P46091 355 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 CCT3P49368 545 aaKnown RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ZNF155Q12901 538 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 TPBGQ13641 420 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 GINS1Q14691 196 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 UAP1L1Q3KQV9 507 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 PPP2R2DQ66LE6 453 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ZNF517Q6ZMY9 492 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 DCUN1D3Q8IWE4 304 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 ARIH2OSQ8N7S6 290 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 PHOSPHO2Q8TCD6 241 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 SPPL3Q8TCT6 385 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 LRR1Q96L50 414 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 C11orf54Q9H0W9 315 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 MMP28Q9H239 520 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 EGLN3Q9H6Z9 239 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 TRPV4Q9HBA0 871 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 BCL2L10Q9HD36 194 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 EXOSC4Q9NPD3 245 aaKnown RBP8.99□□□□□ -0.97
CNOT4-212ENST00000541284 TBC1D14Q9P2M4 693 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 TMCC3Q9ULS5 477 aa8.99□□□□□ -0.97
CNOT4-212ENST00000541284 MEIOCA2RUB1 952 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 PRR19A6NJB7 356 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 A8MV72 311 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-212ENST00000541284 B4DXG7 233 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 H3BN98 237 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 SCO2O43819 266 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 RAB36O95755 333 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 THY1P04216 161 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 ADH1AP07327 375 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 HOXB3P14651 431 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-212ENST00000541284 ZNF24P17028 368 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 CEBPBP17676 345 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 TNNI3P19429 210 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 SOX18P35713 384 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 SLC6A11P48066 632 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 RACK1P63244 317 aaKnown RBP8.98□□□□□ -0.97
CNOT4-212ENST00000541284 UBE3AQ05086 875 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 ATAT1Q5SQI0 421 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 RSBN1Q5VWQ0 802 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-212ENST00000541284 C22orf42Q6IC83 251 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 KRT73Q86Y46 540 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 OR8H2Q8N162 312 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 KRT78Q8N1N4 520 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 TMIEQ8NEW7 156 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 PRR14Q9BWN1 585 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 OR2B2Q9GZK3 357 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 ZNF221Q9UK13 617 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 ASF1AQ9Y294 204 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 GPR55Q9Y2T6 319 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-212ENST00000541284 TMEM129A0AVI4 362 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 KDM4EB2RXH2 506 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-212ENST00000541284 C5orf58C9J3I9 102 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 NDUFS4O43181 175 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 VEGFDO43915 354 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 PDE9AO76083 593 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 ALPPP05187 535 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 FHP07954 510 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 CA8P35219 290 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 CSNK1G2P78368 415 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 FABP5Q01469 135 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 HNRNPA0Q13151 305 aaKnown RBP8.98□□□□□ -0.97
CNOT4-212ENST00000541284 ENPP2Q13822 863 aa8.98□□□□□ -0.97
CNOT4-212ENST00000541284 ARHGAP19Q14CB8 494 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms