RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 SNX4O95219 450 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 ALDOAP04075 364 aaKnown RBP14.84□□□□□ -0.03
TRIM65-203ENST00000540812 BMP7P18075 431 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 S1PR1P21453 382 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 NT5EP21589 574 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 TACR1P25103 407 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 PEX19P40855 299 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 AGFG1P52594 562 aaKnown RBP14.84□□□□□ -0.03
TRIM65-203ENST00000540812 NNATQ16517 81 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 WIPI1Q5MNZ9 446 aaPredicted RBP14.84□□□□□ -0.03
TRIM65-203ENST00000540812 FAM219BQ5XKK7 198 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 NSUN5P2Q63ZY6 315 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 PACS2Q86VP3 889 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 RELL1Q8IUW5 271 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 MMP21Q8N119 569 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 OR4K14Q8NGD5 310 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 ATP6V1E2Q96A05 226 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 WDYHV1Q96HA8 205 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 TMEM41AQ96HV5 264 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 NSUN5Q96P11 429 aaKnown RBP14.84□□□□□ -0.03
TRIM65-203ENST00000540812 SECISBP2Q96T21 854 aaKnown RBP14.84□□□□□ -0.03
TRIM65-203ENST00000540812 NXF5Q9H1B4 397 aaKnown RBP14.84□□□□□ -0.03
TRIM65-203ENST00000540812 VPS11Q9H270 941 aa14.84□□□□□ -0.03
TRIM65-203ENST00000540812 ZNF629Q9UEG4 869 aaPredicted RBP14.84□□□□□ -0.03
TRIM65-203ENST00000540812 TNPO3Q9Y5L0 923 aaKnown RBP14.84□□□□□ -0.03
TRIM65-203ENST00000540812 IL2RAP01589 272 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 ABCB1P08183 1280 aaPredicted RBP14.83□□□□□ -0.04
TRIM65-203ENST00000540812 CPMP14384 443 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 KLK2P20151 261 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 GPX3P22352 226 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 DNASE1P24855 282 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 ABCD3P28288 659 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 TYK2P29597 1187 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 ARL1P40616 181 aaPredicted RBP14.83□□□□□ -0.04
TRIM65-203ENST00000540812 TMED10P49755 219 aaKnown RBP14.83□□□□□ -0.04
TRIM65-203ENST00000540812 SERPINB8P50452 374 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 CCNG1P51959 295 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 NRG3P56975 720 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 MGAT2Q10469 447 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 FOXD4Q12950 439 aaPredicted RBP14.83□□□□□ -0.04
TRIM65-203ENST00000540812 TRAF3Q13114 568 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 TOMM20Q15388 145 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 NHSL2Q5HYW2 709 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 FRG2Q64ET8 278 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 TIGD3Q6B0B8 471 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 KLC3Q6P597 504 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 YRDCQ86U90 279 aaKnown RBP14.83□□□□□ -0.04
TRIM65-203ENST00000540812 PM20D2Q8IYS1 436 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 CHDHQ8NE62 594 aaPredicted RBP14.83□□□□□ -0.04
TRIM65-203ENST00000540812 OR7G1Q8NGA0 311 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 GOT1L1Q8NHS2 421 aaPredicted RBP14.83□□□□□ -0.04
TRIM65-203ENST00000540812 IFT81Q8WYA0 676 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 PHF21BQ96EK2 531 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 FRG2BQ96QU4 278 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 TRIB1Q96RU8 372 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 FMO2Q99518 471 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 MRPL1Q9BYD6 325 aaKnown RBP14.83□□□□□ -0.04
TRIM65-203ENST00000540812 ZBTB26Q9HCK0 441 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 CES1P1Q9UKY3 287 aa14.83□□□□□ -0.04
TRIM65-203ENST00000540812 EXPH5Q8NEV8 1989 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 CD8B2A6NJW9 211 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 PTPN6P29350 595 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 ECHS1P30084 290 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 SOX18P35713 384 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 NAGLUP54802 743 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 DUSP2Q05923 314 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 EXOSC7Q15024 291 aaKnown RBP14.82□□□□□ -0.04
TRIM65-203ENST00000540812 DAZAP2Q15038 168 aaPredicted RBP14.82□□□□□ -0.04
TRIM65-203ENST00000540812 SGO1Q5FBB7 561 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 CCNYL2Q5T2Q4 361 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 METTL2BQ6P1Q9 378 aaKnown RBP14.82□□□□□ -0.04
TRIM65-203ENST00000540812 FAM111BQ6SJ93 734 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 ANGPTL8Q6UXH0 198 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 RPS27LQ71UM5 84 aaKnown RBP14.82□□□□□ -0.04
TRIM65-203ENST00000540812 IFT20Q8IY31 132 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 METTL4Q8N3J2 472 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 C9orf106Q8NAJ2 232 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 SIMC1Q8NDZ2 872 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 FAM83FQ8NEG4 500 aaPredicted RBP14.82□□□□□ -0.04
TRIM65-203ENST00000540812 C17orf47Q8NEP4 570 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 LINC01560Q8TB33 94 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 ABTB1Q969K4 478 aaPredicted RBP14.82□□□□□ -0.04
TRIM65-203ENST00000540812 HSPBAP1Q96EW2 488 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 LRRC46Q96FV0 321 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 NODALQ96S42 347 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 ITPAQ9BY32 194 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 BRINP2Q9C0B6 783 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 ADAM29Q9UKF5 820 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 PCTPQ9UKL6 214 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 PCDHA9Q9Y5H5 950 aa14.82□□□□□ -0.04
TRIM65-203ENST00000540812 A0A1B0GTL3 188 aa14.81□□□□□ -0.04
TRIM65-203ENST00000540812 C2orf72A6NCS6 295 aa14.81□□□□□ -0.04
TRIM65-203ENST00000540812 MBD3L4A6NDZ8 208 aaPredicted RBP14.81□□□□□ -0.04
TRIM65-203ENST00000540812 MBD3L3A6NE82 208 aaPredicted RBP14.81□□□□□ -0.04
TRIM65-203ENST00000540812 MBD3L5A6NJ08 208 aaPredicted RBP14.81□□□□□ -0.04
TRIM65-203ENST00000540812 PPM1BO75688 479 aa14.81□□□□□ -0.04
TRIM65-203ENST00000540812 PORP16435 677 aaPredicted RBP14.81□□□□□ -0.04
TRIM65-203ENST00000540812 HOXB4P17483 251 aaPredicted RBP14.81□□□□□ -0.04
TRIM65-203ENST00000540812 KRT15P19012 456 aa14.81□□□□□ -0.04
TRIM65-203ENST00000540812 CTSSP25774 331 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms