RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	ATG10	Q9H0Y0	220 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TPT1P8	Q9HAU6	139 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRMT8	Q9NR22	394 aa	Predicted RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ARL15	Q9NXU5	204 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DNAJC27	Q9NZQ0	273 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NDUFAF4	Q9P032	175 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KLHL42	Q9P2K6	505 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TMPRSS11E	Q9UL52	423 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PCDHGB2	Q9Y5G2	931 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAM221B	A6H8Z2	402 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FABP12	A6NFH5	140 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NPIPB15	A6NHN6	443 aa	Predicted RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR2AG2	A6NM03	316 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF780A	O75290	641 aa	Predicted RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	UGT2B17	O75795	530 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TSPAN19	P0C672	248 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	JMJD7	P0C870	316 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IL1RN	P18510	177 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CR2	P20023	1033 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MAOB	P27338	520 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CRAT	P43155	626 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RUNX1T1	Q06455	604 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SCN1B	Q07699	218 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PTGES3	Q15185	160 aa	Known RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	UGT8	Q16880	541 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PDZK1	Q5T2W1	519 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PIP5KL1	Q5T9C9	394 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	AGBL4	Q5VU57	503 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LIPK	Q5VXJ0	399 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TMIGD1	Q6UXZ0	262 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SERPINA11	Q86U17	422 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAM20C	Q8IXL6	584 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAM160A2	Q8N612	972 aa	Predicted RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TMEM105	Q8N8V8	129 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DTX3	Q8N9I9	347 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR9Q1	Q8NGQ5	310 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FRMD6	Q96NE9	622 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HDHD5	Q9BXW7	423 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SRR	Q9GZT4	340 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	P2RY12	Q9H244	342 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HHATL	Q9HCP6	504 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GPN3	Q9UHW5	284 aa	Predicted RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SNX7	Q9UNH6	387 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MAN2B2	Q9Y2E5	1009 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	YARS2	Q9Y2Z4	477 aa	Known RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		A0A1W2PQL4	384 aa	Predicted RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PLK4	O00444	970 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PI15	O43692	258 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MRPS14	O60783	128 aa	Known RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ENTPD6	O75354	484 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SEMG1	P04279	462 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CSF3	P09919	207 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	EBLN1	P0CF75	366 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PSKH1	P11801	424 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HOXB9	P17482	250 aa	Predicted RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	EPOR	P19235	508 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CLCNKA	P51800	687 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PNLIPRP1	P54315	467 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CSNK2B	P67870	215 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DMWD	Q09019	674 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAP	Q12884	760 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HNRNPA0	Q13151	305 aa	Known RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ENPP2	Q13822	863 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ADNP2	Q6IQ32	1131 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NOXRED1	Q6NXP6	359 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LSR	Q86X29	649 aa	Predicted RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DCUN1D3	Q8IWE4	304 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CCDC28A	Q8IWP9	274 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C7orf57	Q8NEG2	295 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR4M1	Q8NGD0	313 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GRPEL2	Q8TAA5	225 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ENKUR	Q8TC29	256 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SCAMP4	Q969E2	229 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KIAA1143	Q96AT1	154 aa	Predicted RBP	5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OPALIN	Q96PE5	141 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	VPS35	Q96QK1	796 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C17orf62	Q9BQA9	187 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GABARAPL3	Q9BY60	117 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SLC22A4	Q9H015	551 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NARFL	Q9H6Q4	476 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ERVMER34-1	Q9H9K5	563 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FZD3	Q9NPG1	666 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	STMN3	Q9NZ72	180 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CLCA2	Q9UQC9	943 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ITM2B	Q9Y287	266 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KLK4	Q9Y5K2	254 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KCNE2	Q9Y6J6	123 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LAMA3	Q16787	3333 aa		5.37	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MUC6	Q6W4X9	2439 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRSS38	A1L453	326 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRAMEF25	A6NGN4	478 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TMEM229A	B2RXF0	380 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRAMEF4	O60810	478 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GCM2	O75603	506 aa	Predicted RBP	5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PDGFB	P01127	241 aa	Predicted RBP	5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GBA	P04062	536 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ETFA	P13804	333 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	BPI	P17213	487 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	APEX1	P27695	318 aa	Known RBP	5.36	□□□□□ -1.55

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