RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 JRKO75564 520 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 PRKRAO75569 313 aaKnown RBP9.91□□□□□ -0.82
ATL3-204ENST00000540699 KRT36O76013 467 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 CPSF4O95639 269 aaKnown RBP9.91□□□□□ -0.82
ATL3-204ENST00000540699 C6orf47O95873 294 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 C1QCP02747 245 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 ITGB2P05107 769 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 FHP07954 510 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 PRKAR1AP10644 381 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 EFNA1P20827 205 aaPredicted RBP9.91□□□□□ -0.82
ATL3-204ENST00000540699 ALDH9A1P49189 494 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 EMP2P54851 167 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 LIM2P55344 173 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 RAB38P57729 211 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 HBA1P69905 142 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 TNFRSF17Q02223 184 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 FLOT2Q14254 428 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 ERV3-1Q14264 604 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 MLC1Q15049 377 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 CEBPEQ15744 281 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 ATP1A1-AS1Q5TC04 95 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 C18orf63Q68DL7 685 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 LCN8Q6JVE9 175 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 SLC48A1Q6P1K1 146 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 QSOX2Q6ZRP7 698 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 ZNF551Q7Z340 670 aaPredicted RBP9.91□□□□□ -0.82
ATL3-204ENST00000540699 C10orf111Q8N326 155 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 PLPP5Q8NEB5 264 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 OR4A15Q8NGL6 344 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 PSMA8Q8TAA3 256 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 ZFP90Q8TF47 636 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 OR5P2Q8WZ92 322 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 AURKBQ96GD4 344 aaPredicted RBP9.91□□□□□ -0.82
ATL3-204ENST00000540699 PEX11GQ96HA9 241 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 ZNF583Q96ND8 569 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 SH3GL1Q99961 368 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 YIPF2Q9BWQ6 316 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 VN1R1Q9GZP7 353 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 RASSF4Q9H2L5 321 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 RNPEPL1Q9HAU8 725 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 ACSS1Q9NUB1 689 aaPredicted RBP9.91□□□□□ -0.82
ATL3-204ENST00000540699 C5AR2Q9P296 337 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 C3orf18Q9UK00 162 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 PRDM4Q9UKN5 801 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 FBXW2Q9UKT8 454 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 USP22Q9UPT9 525 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 POLHQ9Y253 713 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 MMACHCQ9Y4U1 282 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 NAV2Q8IVL1 2488 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 FLNCQ14315 2725 aa9.91□□□□□ -0.82
ATL3-204ENST00000540699 CNTRLQ7Z7A1 2325 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 IGKV3D-11A0A0A0MRZ8 115 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 A0A1W2PRB8 838 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 TCRBV3S1A0A5B6 114 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 BLACEA4D250 179 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 CDC14CA4D256 554 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 WASHC1A8K0Z3 465 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 MYO1GB0I1T2 1018 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 FAM220BPB1ANY3 271 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 CLIC1O00299 241 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 PGRMC2O15173 223 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 ALOX12BO75342 701 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 WISP1O95388 367 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 PSMG1O95456 288 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 ANP32DO95626 131 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 C8BP07358 591 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 NR2F6P10588 404 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 GPX2P18283 190 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 ATP6V1B2P21281 511 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 OTX2P32243 289 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 MVDP53602 400 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 OR4D2P58180 307 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 AAGABQ6PD74 315 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 KIRREL2Q6UWL6 708 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 SHISA6Q6ZSJ9 500 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 ZNF621Q6ZSS3 439 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 APLFQ8IW19 511 aaPredicted RBP9.9□□□□□ -0.82
ATL3-204ENST00000540699 ZNF595Q8IYB9 648 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 PRSS58Q8IYP2 241 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 BHLHE22Q8NFJ8 381 aaPredicted RBP9.9□□□□□ -0.82
ATL3-204ENST00000540699 OR11G2Q8NGC1 345 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 OR10A6Q8NH74 314 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 EXOSC8Q96B26 276 aaKnown RBP9.9□□□□□ -0.82
ATL3-204ENST00000540699 ZNF681Q96N22 645 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 CSF3RQ99062 836 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 KCTD14Q9BQ13 255 aaPredicted RBP9.9□□□□□ -0.82
ATL3-204ENST00000540699 EPS8L2Q9H6S3 715 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 CXorf36Q9H7Y0 433 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 TPT1P8Q9HAU6 139 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 SLC35C2Q9NQQ7 365 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 SIRT3Q9NTG7 399 aaPredicted RBP9.9□□□□□ -0.82
ATL3-204ENST00000540699 MS4A12Q9NXJ0 267 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 TAS2R9Q9NYW1 312 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 ACTR3BQ9P1U1 418 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 PHF11Q9UIL8 331 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 UTS2RQ9UKP6 389 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 MKL2Q9ULH7 1088 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 VPS4AQ9UN37 437 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 CLDN16Q9Y5I7 305 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 SNX13Q9Y5W8 968 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms