RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 NNATQ16517 81 aa16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 PLEKHM3Q6ZWE6 761 aa16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 SHISA5Q8N114 240 aa16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 METTL27Q8N6F8 245 aaPredicted RBP16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 TP53I13Q8NBR0 393 aaPredicted RBP16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 MS4A6EQ96DS6 147 aa16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 WDR34Q96EX3 536 aa16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 MGLLQ99685 303 aa16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 CENPOQ9BU64 300 aa16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 POLR2J2Q9GZM3 115 aaKnown RBP16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 GABARAPL1Q9H0R8 117 aa16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 APOBEC3BQ9UH17 382 aaKnown RBP16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 CARD8Q9Y2G2 431 aa16.12■□□□□ 0.17
EPB41L3-204ENST00000540638 STXBP1P61764 594 aaKnown RBP16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 TPRG1LQ5T0D9 272 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 BHLHB9Q6PI77 547 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 PAQR6Q6TCH4 344 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 POC5Q8NA72 575 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 SERHL2Q9H4I8 314 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 EGLN3Q9H6Z9 239 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 SIRT3Q9NTG7 399 aaPredicted RBP16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 KLHL28Q9NXS3 571 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 PSORS1C1Q9UIG5 152 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 SNRNP200O75643 2136 aaKnown RBP16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 SOBPA7XYQ1 873 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 K7EQS6 105 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 FCMRO60667 390 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 CLEC3AO75596 197 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 GPR4P46093 362 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 HYAL1Q12794 435 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 ILF3Q12906 894 aaKnown RBP eCLIP16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 ABHD17CQ6PCB6 329 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 OR8H2Q8N162 312 aa16.11■□□□□ 0.17
EPB41L3-204ENST00000540638 KDM1AO60341 852 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 ADORA3P0DMS8 318 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 NR2F6P10588 404 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 ELAVL4P26378 380 aaKnown RBP16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 HYAL2Q12891 473 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 FIGNL1Q6PIW4 674 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 FAM92BQ6ZTR7 304 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 FAM46DQ8NEK8 389 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 OR2L5Q8NG80 312 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 GOT1L1Q8NHS2 421 aaPredicted RBP16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 SNTG1Q9NSN8 517 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 CYP8B1Q9UNU6 501 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 AP3D1O14617 1153 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 DNAJB5O75953 348 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 RPLP0P05388 317 aaKnown RBP16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 CDK1P06493 297 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 CTHP32929 405 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 ANXA11P50995 505 aaKnown RBP16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 SRSF5Q13243 272 aaKnown RBP16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 LIPKQ5VXJ0 399 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 SAXO2Q658L1 398 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 KIAA1161Q6NSJ0 714 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 GATAD2AQ86YP4 633 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 GHDCQ8N2G8 530 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 AMER2Q8N7J2 671 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 SLC16A11Q8NCK7 471 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 RERGQ96A58 199 aaPredicted RBP16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 FAM46AQ96IP4 442 aaKnown RBP16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 ZNF354BQ96LW1 612 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 DOK1Q99704 481 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 CAB39Q9Y376 341 aaPredicted RBP16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 HSPE1-MOB4S4R3N1 261 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 TRANK1O15050 2925 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 DNAJB6O75190 326 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 CHRM4P08173 479 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 RPS7P62081 194 aaKnown RBP16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 ZNF658BQ4V348 819 aaPredicted RBP16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 SLC35F1Q5T1Q4 408 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 TTLQ8NG68 377 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 OR9Q1Q8NGQ5 310 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 TP53INP1Q96A56 240 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 LRR1Q96L50 414 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 TBX5Q99593 518 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 DZANK1Q9NVP4 752 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 HRASLS2Q9NWW9 162 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 ANKMY1Q9P2S6 941 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 SNX7Q9UNH6 387 aa16.1■□□□□ 0.17
EPB41L3-204ENST00000540638 MTCL1Q9Y4B5 1905 aaKnown RBP16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 FAM170BA6NMN3 283 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 B4DGG1 531 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 GMFGO60234 142 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 GABARAPO95166 117 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 ALPPP05187 535 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 OR5T3Q8NGG3 340 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 TSSK6Q9BXA6 273 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 C1QTNF2Q9BXJ5 285 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 TPSD1Q9BZJ3 242 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 WASH6PQ9NQA3 447 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 SEMG1P04279 462 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 BMP4P12644 408 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 PKLRP30613 574 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 TRIM23P36406 574 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 ARMC6Q6NXE6 501 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 USP30Q70CQ3 517 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 UBE2J2Q8N2K1 259 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 OR2L8Q8NGY9 312 aa16.09■□□□□ 0.17
EPB41L3-204ENST00000540638 TEX47Q8TBZ9 253 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms