RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 NEK2P51955 445 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 PLTPP55058 493 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 IRF9Q00978 393 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 SNTA1Q13424 505 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 KEAP1Q14145 624 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 DEFB113Q30KQ7 82 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 EIPR1Q53HC9 387 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 WIPI1Q5MNZ9 446 aaPredicted RBP10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 FBXW10Q5XX13 1052 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 SLC30A6Q6NXT4 461 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 PAGE2Q7Z2X7 111 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 OR1J4Q8NGS1 313 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 TRPC4APQ8TEL6 797 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 ZFP3Q96NJ6 502 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 EPB41L4BQ9H329 900 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 PLEKHF2Q9H8W4 249 aa10.96□□□□□ -0.65
CBX3P4-202ENST00000540428 ARHGAP21Q5T5U3 1957 aa10.96□□□□□ -0.66
CBX3P4-202ENST00000540428 A0A096LPK6 155 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 LRRC14BA6NHZ5 514 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 GOLGA6L10A6NI86 522 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 EEF1E1-BLOC1S5C9J1V9 151 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 GNB5O14775 395 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 SNPHO15079 494 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 ACOX3O15254 700 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 EEF1E1O43324 174 aaKnown RBP10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 GUCY1B2O75343 617 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 PPM1BO75688 479 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 GBAP04062 536 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 CYP4B1P13584 511 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 PORP16435 677 aaPredicted RBP10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 S1PR1P21453 382 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 NT5EP21589 574 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 NAGLUP54802 743 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 GUCY2DQ02846 1103 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 MAP4K2Q12851 820 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 TOMM20Q15388 145 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 DCST1Q5T197 706 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 MROH9Q5TGP6 573 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 FRG2Q64ET8 278 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 SCIMPQ6UWF3 145 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 ENPP6Q6UWR7 440 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 NUP54Q7Z3B4 507 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 VWA5B2Q8N398 1253 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 FAM83FQ8NEG4 500 aaPredicted RBP10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 FBXO25Q8TCJ0 367 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 HGDQ93099 445 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 ATP6V1E2Q96A05 226 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 DACH2Q96NX9 599 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 GPR78Q96P69 363 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 FRG2BQ96QU4 278 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 UCN2Q96RP3 112 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 NTMT1Q9BV86 223 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 SFXN3Q9BWM7 321 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 RAB17Q9H0T7 212 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 NXF5Q9H1B4 397 aaKnown RBP10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 ACBD3Q9H3P7 528 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 NOL11Q9H8H0 719 aaKnown RBP10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 METTL7AQ9H8H3 244 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 TMCO1Q9UM00 188 aa10.95□□□□□ -0.66
CBX3P4-202ENST00000540428 C1orf226A1L170 272 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 HMX2A2RU54 273 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 CLCA1A8K7I4 914 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 STX16-NPEPL1H3BU86 382 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 OR7A17O14581 309 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 STX16O14662 325 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 ERN1O75460 977 aaKnown RBP10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 CBR3O75828 277 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 RCBTB2O95199 551 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 SIX3O95343 332 aaPredicted RBP10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 ATP1B1P05026 303 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 KLK1P06870 262 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 TMIGD3P0DMS9 266 aaPredicted RBP10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 DRD2P14416 443 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 PTGDSP41222 190 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 SERPINB8P50452 374 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 DCAF7P61962 342 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 EEF1A1P68104 462 aaKnown RBP10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 PRICKLE4Q2TBC4 344 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 GGTA1PQ4G0N0 100 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 TECRLQ5HYJ1 363 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 CCNYL2Q5T2Q4 361 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 EEF1A1P5Q5VTE0 462 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 SLC48A1Q6P1K1 146 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 ZDHHC24Q6UX98 284 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 ANGPTL8Q6UXH0 198 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 ADGRE4PQ86SQ3 457 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 YRDCQ86U90 279 aaKnown RBP10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 BIVMQ86UB2 503 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 CCDC25Q86WR0 208 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 PRR22Q8IZ63 422 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 MMP21Q8N119 569 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 METTL4Q8N3J2 472 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 C9orf106Q8NAJ2 232 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 LINC01560Q8TB33 94 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 ISL2Q96A47 359 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 DTNBP1Q96EV8 351 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 LCORQ96JN0 433 aaPredicted RBP10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 TM9SF2Q99805 663 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 YIPF4Q9BSR8 244 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 RBM24Q9BX46 236 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms