RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 SLC1A6P48664 564 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 NR0B1P51843 470 aaKnown RBP12.36□□□□□ -0.43
CCDC130-202ENST00000540216 RBPJQ06330 500 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 STX3Q13277 289 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 LTB4RQ15722 352 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 SMU1Q2TAY7 513 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 EIF2S3LQ2VIR3 472 aaKnown RBP12.36□□□□□ -0.43
CCDC130-202ENST00000540216 TRMT12Q53H54 448 aaKnown RBP12.36□□□□□ -0.43
CCDC130-202ENST00000540216 FAM180BQ6P0A1 224 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 RGS9BPQ6ZS82 235 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 SIAH3Q8IW03 269 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 CPSF7Q8N684 471 aaKnown RBP12.36□□□□□ -0.43
CCDC130-202ENST00000540216 OR52R1Q8NGF1 315 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 OR9A2Q8NGT5 310 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 RAB3IL1Q8TBN0 382 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 PAQR8Q8TEZ7 354 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 ZBTB9Q96C00 473 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 MTERF3Q96E29 417 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 FAM173AQ9BQD7 235 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 REEP4Q9H6H4 257 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 SH2D2AQ9NP31 389 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 CNIH4Q9P003 139 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 BCAP29Q9UHQ4 241 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 EXO1Q9UQ84 846 aaKnown RBP12.36□□□□□ -0.43
CCDC130-202ENST00000540216 CROCCQ5TZA2 2017 aa12.36□□□□□ -0.43
CCDC130-202ENST00000540216 USP9XQ93008 2570 aaPredicted RBP12.36□□□□□ -0.43
CCDC130-202ENST00000540216 A0A087WV62 115 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 ACOT7O00154 380 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 TP53I11O14683 189 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 TFECO14948 347 aaPredicted RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 PDPK1O15530 556 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 ITM2AO43736 263 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 COQ9O75208 318 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 AGFG2O95081 481 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 UNC5CO95185 931 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 STSP08842 583 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 BCKDHAP12694 445 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 NAGAP17050 411 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 CNR1P21554 472 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 DRD5P21918 477 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 SOX18P35713 384 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 RPL3P39023 403 aaKnown RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 EMDP50402 254 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 RPL14P50914 215 aaKnown RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 NCBP2P52298 156 aaKnown RBP eCLIP12.35□□□□□ -0.436e-9■■■■□ 19.5
CCDC130-202ENST00000540216 WDR4P57081 412 aaKnown RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 GPR85P60893 370 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 RPP38P78345 283 aaKnown RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 MRPS35P82673 323 aaKnown RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 SRSF11Q05519 484 aaKnown RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 DUSP8Q13202 625 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 MAD2L1Q13257 205 aaPredicted RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 PDE7AQ13946 482 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 EXOSC7Q15024 291 aaKnown RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 RPS6KA2Q15349 733 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 NTRK2Q16620 822 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 TBCELQ5QJ74 424 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 C6orf136Q5SQH8 315 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 CES4AQ5XG92 561 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 SLC22A10Q63ZE4 541 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 FAM47EQ6ZV65 393 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 R3HCC1LQ7Z5L2 792 aaKnown RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 TRIM42Q8IWZ5 723 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 FBXW8Q8N3Y1 598 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 ZNF781Q8N8C0 355 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 FAM13CQ8NE31 585 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 OR2M7Q8NG81 312 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 ZFP28Q8NHY6 868 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 PPCDCQ96CD2 204 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 TUBGCP3Q96CW5 907 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 HSPBAP1Q96EW2 488 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 EGLN2Q96KS0 407 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 C3orf30Q96M34 536 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 TSSK3Q96PN8 268 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 BTBD9Q96Q07 612 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 SECISBP2Q96T21 854 aaKnown RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 SORT1Q99523 831 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 PAIP2Q9BPZ3 127 aaKnown RBP12.35□□□□□ -0.43
CCDC130-202ENST00000540216 DEPPQ9NTK1 212 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 TAS2R9Q9NYW1 312 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 SLC5A6Q9Y289 635 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 NPFFR2Q9Y5X5 522 aa12.35□□□□□ -0.43
CCDC130-202ENST00000540216 ZGRF1Q86YA3 2104 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 ATP6AP2A0A1C7CYW4 349 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 FRG2CA6NGY1 282 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 NPIPA5E9PKD4 350 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 PLOD2O00469 737 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 PEX11AO75192 247 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 ATP6AP2O75787 350 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 CCL3P10147 92 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 PRPS2P11908 318 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 H2AFXP16104 143 aaPredicted RBP12.34□□□□□ -0.43
CCDC130-202ENST00000540216 PTGER1P34995 402 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 HPCAL1P37235 193 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 PPICP45877 212 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 SRSF1Q07955 248 aaKnown RBP eCLIP12.34□□□□□ -0.438e-8■■■□□ 15.4
CCDC130-202ENST00000540216 BST1Q10588 318 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 RNFT1Q5M7Z0 435 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 HDXQ7Z353 690 aa12.34□□□□□ -0.43
CCDC130-202ENST00000540216 SLC22A16Q86VW1 577 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms