RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 TMCC2O75069 709 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 ICOSLGO75144 302 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 SOX30O94993 753 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 TGM6O95932 706 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 RHOXF2BP0C7M4 288 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 PCNAP12004 261 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 KRT15P19012 456 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 ABCD3P28288 659 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 LOXP28300 417 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 ELK3P41970 407 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 STARP49675 285 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 RAP1GDS1P52306 607 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 ARFIP1P53367 373 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 GFRA1P56159 465 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 RPS13P62277 151 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 DMTNQ08495 405 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 SNTA1Q13424 505 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 KBTBD12Q3ZCT8 623 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 OR2A2Q6IF42 318 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 ZNF474Q6S9Z5 364 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 NUP54Q7Z3B4 507 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 GPSM1Q86YR5 675 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 GRAMD2AQ8IUY3 354 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 PRR22Q8IZ63 422 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 C17orf47Q8NEP4 570 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 TRIM58Q8NG06 486 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 OR7G3Q8NG95 312 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 TMEM171Q8WVE6 324 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 CFAP36Q96G28 342 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 PIGQQ9BRB3 760 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 OR2B2Q9GZK3 357 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 DERL2Q9GZP9 239 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 OR10A5Q9H207 317 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 CXorf56Q9H5V9 222 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 ACTR8Q9H981 624 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 CXorf21Q9HAI6 301 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 LZTFL1Q9NQ48 299 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 SERHLQ9NQF3 203 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 ADGRE2Q9UHX3 823 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 PTBP2Q9UKA9 531 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 RNF112Q9ULX5 631 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 DLGAP4Q9Y2H0 992 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 ASB4Q9Y574 426 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 WIF1Q9Y5W5 379 aa10.54□□□□□ -0.72
CLSTN3-209ENST00000539982 HEATR5AQ86XA9 2040 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 A0A1W2PR48 441 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 C2orf72A6NCS6 295 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 LRRC14BA6NHZ5 514 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 GLOD5A6NK44 160 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 KIF2AO00139 706 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 PLPP1O14494 284 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 DNALI1O14645 258 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 HCRTR2O43614 444 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 CCNT2O60583 730 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 PPM1BO75688 479 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 NID1P14543 1247 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 POU2F1P14859 743 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 PTGDSP41222 190 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 LHX2P50458 406 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 ATP5J2P56134 94 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 FRG1Q14331 258 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 HP1BP3Q5SSJ5 553 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 AAGABQ6PD74 315 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 BTLAQ7Z6A9 289 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 IFNEQ86WN2 208 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 HIPK1Q86Z02 1210 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 SPATA6LQ8N4H0 392 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 CNEP1R1Q8N9A8 125 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 WDSUB1Q8N9V3 476 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 RDH11Q8TC12 318 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 GRK7Q8WTQ7 553 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 HGDQ93099 445 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 PGM2Q96G03 612 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 ZC3HAV1LQ96H79 300 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 MS4A14Q96JA4 679 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 C16orf45Q96MC5 204 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 NODALQ96S42 347 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 CENPKQ9BS16 269 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 CD244Q9BZW8 370 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 WDR41Q9HAD4 459 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 RRAGDQ9NQL2 400 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 LYARQ9NX58 379 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 TAS2R10Q9NYW0 307 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 CD274Q9NZQ7 290 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 MAPRE3Q9UPY8 281 aa10.53□□□□□ -0.72
CLSTN3-209ENST00000539982 USF3Q68DE3 2245 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 RNF223E7ERA6 249 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 CT62P0C5K7 136 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 FAM58BPP0C7Q3 252 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 ZNF708P17019 499 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 PTX3P26022 381 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 GMPRP36959 345 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 PIK3CBP42338 1070 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 SLC12A2P55011 1212 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 NR1H2P55055 460 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 CLDN18P56856 261 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 MGAT5Q09328 741 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 PPP1R7Q15435 360 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 BCL2A1Q16548 175 aa10.52□□□□□ -0.73
CLSTN3-209ENST00000539982 STEAP4Q687X5 459 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms