RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 BUD31P41223 144 aaPredicted RBP7.09□□□□□ -1.27
GNE-205ENST00000539815 CDKN2BP42772 138 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 OLR1P78380 273 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 IL1RL1Q01638 556 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 ZNF844Q08AG5 666 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 LSM12Q3MHD2 195 aaKnown RBP7.09□□□□□ -1.27
GNE-205ENST00000539815 RTL4Q6ZR62 310 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 CHSY3Q70JA7 882 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 LUZP2Q86TE4 346 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 LAPTM4BQ86VI4 370 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 SLC22A9Q8IVM8 553 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 CTAGE3PQ8IX95 158 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 RFWD2Q8NHY2 731 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 FAM173AQ9BQD7 235 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 CD274Q9NZQ7 290 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 KCMF1Q9P0J7 381 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 PCDHA13Q9Y5I0 950 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 LOC105369274A0A096LPK9 316 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 LOC102723532A0A0G2JNH3 316 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 KERAO60938 352 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 HNRNPFP52597 415 aaKnown RBP7.09□□□□□ -1.27
GNE-205ENST00000539815 IRF8Q02556 426 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 DUPD1Q68J44 220 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 SZRD1Q7Z422 152 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 OR4N4Q8N0Y3 316 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 OR4K17Q8NGC6 315 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 OR14L1PQ8NHC6 308 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 VPS33AQ96AX1 596 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 PLEKHA8Q96JA3 519 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 ZNF597Q96LX8 424 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 TRIB1Q96RU8 372 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 VPS11Q9H270 941 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 KCNN2Q9H2S1 579 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 ACTR3BQ9P1U1 418 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 VTI1BQ9UEU0 232 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 J3QRK9 145 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 RGS13O14921 159 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 NUPL2O15504 423 aaKnown RBP7.09□□□□□ -1.27
GNE-205ENST00000539815 PJA2O43164 708 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 SCO2O43819 266 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 AGR2O95994 175 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 C8GP07360 202 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 SMIM18P0DKX4 95 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 HOXB1P14653 301 aaPredicted RBP7.09□□□□□ -1.27
GNE-205ENST00000539815 ZNF12P17014 697 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 PPP2R1BP30154 601 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 PLIN5Q00G26 463 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 SERTAD2Q14140 314 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 TOR1AIP1Q5JTV8 583 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 C1orf185Q5T7R7 199 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 RANBP10Q6VN20 620 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 LANCL3Q6ZV70 420 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 CLNKQ7Z7G1 428 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 SLC22A15Q8IZD6 547 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 SLC9A6Q92581 669 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 FBXL8Q96CD0 374 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 OR1F2PQ96R84 312 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 PSD2Q9BQI7 771 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 STMN4Q9H169 189 aaPredicted RBP7.09□□□□□ -1.27
GNE-205ENST00000539815 SEMA5BQ9P283 1151 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 ST6GALNAC2Q9UJ37 374 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 OR10H1Q9Y4A9 318 aa7.09□□□□□ -1.27
GNE-205ENST00000539815 MYOCOSA0A1B0GUC4 107 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 OR1I1O60431 355 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 NIPSNAP2O75323 286 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 ITGA10O75578 1167 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 RNF224P0DH78 156 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 PSMA4P25789 261 aaKnown RBP7.08□□□□□ -1.28
GNE-205ENST00000539815 ATP5J2P56134 94 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 DCAF7P61962 342 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 EEF1A1P68104 462 aaKnown RBP7.08□□□□□ -1.28
GNE-205ENST00000539815 ZMYND11Q15326 602 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 ACSBG2Q5FVE4 666 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 EEF1A1P5Q5VTE0 462 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 PODNL1Q6PEZ8 512 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 DOLPP1Q86YN1 238 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 GRK7Q8WTQ7 553 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 C1orf54Q8WWF1 131 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 PERPQ96FX8 193 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 ZNF486Q96H40 463 aaPredicted RBP7.08□□□□□ -1.28
GNE-205ENST00000539815 TRIB3Q96RU7 358 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 C9orf16Q9BUW7 83 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 BEX2Q9BXY8 128 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 NPDC1Q9NQX5 325 aaPredicted RBP7.08□□□□□ -1.28
GNE-205ENST00000539815 FGFR1OP2Q9NVK5 253 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 AHSPQ9NZD4 102 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 SLC7A8Q9UHI5 535 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 ADGRE2Q9UHX3 823 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 NEU3Q9UQ49 428 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 TCAF1Q9Y4C2 921 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 MAGEB16A2A368 324 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 MAGEB17A8MXT2 336 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 LINC00587B1AMM8 73 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 CCDC22O60826 627 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 SH3BGRLO75368 114 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 CRCPO75575 148 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 FTCDO95954 541 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 CDH1P12830 882 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 RAC2P15153 192 aa7.08□□□□□ -1.28
GNE-205ENST00000539815 MSX1P28360 303 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms