RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SIRPB2Q5JXA9 342 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ATAD3BQ5T9A4 648 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 DNM1P46Q6ZS02 220 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC91Q7Z6B0 441 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SERINC5Q86VE9 423 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CBWD2Q8IUF1 395 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NKAIN4Q8IVV8 208 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 STHQ8IWL8 128 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NIPA2Q8N8Q9 360 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NFAM1Q8NET5 270 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 OR2T34Q8NGX1 318 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 OR10T2Q8NGX3 314 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 BRSK1Q8TDC3 778 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 HCAR2Q8TDS4 363 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ATP8B4Q8TF62 1192 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NTNG2Q96CW9 530 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF583Q96ND8 569 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TESK2Q96S53 571 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 PLIN2Q99541 437 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 C19orf24Q9BVV8 132 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CDK19Q9BWU1 502 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TEX13AQ9BXU3 409 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TMPRSS5Q9H3S3 457 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 MCCC2Q9HCC0 563 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TRPV5Q9NQA5 729 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SPATA7Q9P0W8 599 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF624Q9P2J8 865 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 PILRAQ9UKJ1 303 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ARHGAP23Q9P227 1491 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 IGHV4-4A0A075B6R2 117 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 A0A087WUV0 522 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 A0A087WW49 117 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 IGLV9-49A0A0B4J1Y8 123 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 L7N2F9 121 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF195O14628 629 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CTAGE5O15320 804 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 KLHL41O60662 606 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TRIM3O75382 744 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NUDT14O95848 222 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 EPOP01588 193 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 KRT14P02533 472 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ALPLP05186 524 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ASGR1P07306 291 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC159P0C7I6 412 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SLC35G4P0C7Q5 338 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 PATE4P0C8F1 98 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 THRBP10828 461 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TBPP20226 339 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TFPI2P48307 235 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF131P52739 623 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CDH4P55283 916 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SRP54P61011 504 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CHIT1Q13231 466 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 GNMTQ14749 295 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TECRLQ5HYJ1 363 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 AGAP7PQ5VUJ5 663 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TAF3Q5VWG9 929 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NADSYN1Q6IA69 706 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF852Q6ZMS4 543 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 STXBP4Q6ZWJ1 553 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CREB3L2Q70SY1 520 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 LINC01561Q8N1V8 128 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 OR4A16Q8NH70 328 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC110Q8TBZ0 833 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 DNAJA4Q8WW22 397 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 RAB39BQ96DA2 213 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 GMPPAQ96IJ6 420 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 C4orf45Q96LM5 186 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NOL4LQ96MY1 436 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF578Q96N58 590 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TEX13BQ9BXU2 312 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 RAB33BQ9H082 229 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 RIMS4Q9H426 269 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ACTR8Q9H981 624 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 MEAF6Q9HAF1 191 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF334Q9HCZ1 680 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 RAB18Q9NP72 206 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SIX2Q9NPC8 291 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ATAD3AQ9NVI7 634 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NLGN3Q9NZ94 848 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ICAM5Q9UMF0 924 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 STUB1Q9UNE7 303 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 FAF1Q9UNN5 650 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NIP7Q9Y221 180 aaKnown RBP eCLIP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CAB39Q9Y376 341 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 MRPS18CQ9Y3D5 142 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CAMTA1Q9Y6Y1 1673 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 A0A1W2PPE3 182 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 A0A1W2PPW3 197 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ANKRD61A6NGH8 418 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 H3BNX3 289 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 P2RY10O00398 339 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NR5A2O00482 541 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TFECO14948 347 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 MAGEB3O15480 346 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TAPBPO15533 448 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 B4GAT1O43505 415 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NXPH2O95156 264 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NXPH4O95158 308 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 POP4O95707 220 aaKnown RBP0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms