RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 H2AFJQ9BTM1 129 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 G6PC3Q9BUM1 346 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 HDHD5Q9BXW7 423 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 STMN4Q9H169 189 aaPredicted RBP8.24□□□□□ -1.09
USP28-205ENST00000537706 METTL17Q9H7H0 456 aaPredicted RBP8.24□□□□□ -1.09
USP28-205ENST00000537706 CBLN4Q9NTU7 201 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 WWOXQ9NZC7 414 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 PCDHB10Q9UN67 800 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 ZNF175Q9Y473 711 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 HEATR5AQ86XA9 2040 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 ESYT3A0FGR9 886 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 C3orf80F5H4A9 247 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 PGRMC1O00264 195 aaKnown RBP8.23□□□□□ -1.09
USP28-205ENST00000537706 ERI3O43414 337 aaKnown RBP8.23□□□□□ -1.09
USP28-205ENST00000537706 PLGP00747 810 aaPredicted RBP8.23□□□□□ -1.09
USP28-205ENST00000537706 PEPDP12955 493 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 ZNF708P17019 499 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 RBMXP38159 391 aaKnown RBP8.23□□□□□ -1.09
USP28-205ENST00000537706 CETN2P41208 172 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 CASP3P42574 277 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 STARP49675 285 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 LHX2P50458 406 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 NEK2P51955 445 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 HNRNPFP52597 415 aaKnown RBP8.23□□□□□ -1.09
USP28-205ENST00000537706 CTBP2P56545 445 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 FBXW4P57775 412 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 FNDC7Q5VTL7 733 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 BICRALQ6AI39 1079 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 LRRC8EQ6NSJ5 796 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 SLC30A6Q6NXT4 461 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 FBXL14Q8N1E6 418 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 TTLQ8NG68 377 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 OR6K3Q8NGY3 331 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 RDH11Q8TC12 318 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 CCT6BQ92526 530 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 SNF8Q96H20 258 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 MS4A14Q96JA4 679 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 BIRC8Q96P09 236 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 SERINC2Q96SA4 455 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 USB1Q9BQ65 265 aaKnown RBP8.23□□□□□ -1.09
USP28-205ENST00000537706 HEMGNQ9BXL5 484 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 GOLPH3Q9H4A6 298 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 KLHL31Q9H511 634 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 VIPAS39Q9H9C1 493 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 TAS2R10Q9NYW0 307 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 DYRK1BQ9Y463 629 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 FKBP7Q9Y680 259 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 TGP01266 2768 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 E7EVH7 732 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 COL6A2P12110 1019 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 NPPBP16860 134 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 COMTP21964 271 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 KCNC1P48547 511 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 EFNA4P52798 201 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 REEP5Q00765 189 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 PLIN5Q00G26 463 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 CASP8Q14790 479 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 TRIM40Q6P9F5 258 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 KATNAL2Q8IYT4 538 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 ZNF540Q8NDQ6 660 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 AENQ8WTP8 325 aaKnown RBP8.23□□□□□ -1.09
USP28-205ENST00000537706 SLC5A11Q8WWX8 675 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 HSD17B8Q92506 261 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 PELOQ9BRX2 385 aaKnown RBP8.23□□□□□ -1.09
USP28-205ENST00000537706 LRRC1Q9BTT6 524 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 OSBPL11Q9BXB4 747 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 TRIM2Q9C040 744 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 WWTR1Q9GZV5 400 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 PELI2Q9HAT8 420 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 PLSCR4Q9NRQ2 329 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 MED29Q9NX70 200 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 ARL15Q9NXU5 204 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 WHRNQ9P202 907 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 DKKL1Q9UK85 242 aa8.23□□□□□ -1.09
USP28-205ENST00000537706 MIF4GDA9UHW6 222 aaKnown RBP8.22□□□□□ -1.09
USP28-205ENST00000537706 CCDC188H7C350 402 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 H2AFYO75367 372 aaKnown RBP8.22□□□□□ -1.09
USP28-205ENST00000537706 TNFRSF21O75509 655 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 C8GP07360 202 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 PSMB1P20618 241 aaKnown RBP8.22□□□□□ -1.09
USP28-205ENST00000537706 IL32P24001 234 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 NR4A2P43354 598 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 STT3AP46977 705 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 LIM2P55344 173 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 GFRA1P56159 465 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 CLDN18P56856 261 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 COPS2P61201 443 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 RPS3AP61247 264 aaKnown RBP8.22□□□□□ -1.09
USP28-205ENST00000537706 DUPD1Q68J44 220 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 SHQ1Q6PI26 577 aaKnown RBP8.22□□□□□ -1.09
USP28-205ENST00000537706 DEF8Q6ZN54 512 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 USP43Q70EL4 1123 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 TEX29Q8N6K0 151 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 LPGAT1Q92604 370 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 FBXL20Q96IG2 436 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 PRR14Q9BWN1 585 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 PRRG4Q9BZD6 226 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 ROGDIQ9GZN7 287 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 SERHLQ9NQF3 203 aa8.22□□□□□ -1.09
USP28-205ENST00000537706 HEY2Q9UBP5 337 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms