RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PLEKHF2Q9H8W4 249 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 CXorf21Q9HAI6 301 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 GALNT8Q9NY28 637 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 MAPRE3Q9UPY8 281 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 TSC22D4Q9Y3Q8 395 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 ASB4Q9Y574 426 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 FREM3P0C091 2139 aa11.84□□□□□ -0.51
TNFRSF1A-207ENST00000535958 HRNRQ86YZ3 2850 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GOLGA6L10A6NI86 522 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FAM159BA6NKW6 160 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 H0YIV9 168 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SMPD2O60906 423 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PPM1BO75688 479 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GBAP04062 536 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CLPSP04118 112 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 HRGP04196 525 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 HEXAP06865 529 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GSTA2P09210 222 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PTPN6P29350 595 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 HOXC12P31275 282 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 STX2P32856 288 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 BSGP35613 385 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 XKP51811 444 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 EEF1A1P68104 462 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NNATQ16517 81 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PFKFB4Q16877 469 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 Q5PR19 223 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 DCST1Q5T197 706 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 EEF1A1P5Q5VTE0 462 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 TTC19Q6DKK2 380 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 MRM1Q6IN84 353 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SLC30A6Q6NXT4 461 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CCDC91Q7Z6B0 441 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ISCA2Q86U28 154 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 IFNEQ86WN2 208 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 VWA5B2Q8N398 1253 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 C17orf47Q8NEP4 570 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NUDT8Q8WV74 236 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 UCN3Q969E3 161 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NTNG2Q96CW9 530 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SERPINI1Q99574 410 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PIGMQ9H3S5 423 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 AHSPQ9NZD4 102 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 BCAP29Q9UHQ4 241 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ACOT9Q9Y305 439 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 TNPO3Q9Y5L0 923 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SAR1BQ9Y6B6 198 aa11.83□□□□□ -0.52
TNFRSF1A-207ENST00000535958 MPDZO75970 2070 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 A0A087X1B8 175 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 A0A1B0GTL3 188 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 WASHC1A8K0Z3 465 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SNPHO15079 494 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GUCY1B2O75343 617 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SEMA3DO95025 777 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 RHOXF2BP0C7M4 288 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CPMP14384 443 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PORP16435 677 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NAGAP17050 411 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CD53P19397 219 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GPX3P22352 226 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NAGLUP54802 743 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ALDH18A1P54886 795 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FUT7Q11130 342 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GAB1Q13480 694 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NAB1Q13506 487 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GTF2H2Q13888 395 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FNDC7Q5VTL7 733 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GTF2H2CQ6P1K8 395 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 AAGABQ6PD74 315 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CHMP1BQ7LBR1 199 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NUP54Q7Z3B4 507 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 P4HA3Q7Z4N8 544 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CCDC25Q86WR0 208 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CREG2Q8IUH2 290 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GRAMD2AQ8IUY3 354 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GCNT2Q8N0V5 402 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ADCY4Q8NFM4 1077 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 RHEBL1Q8TAI7 183 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 RDH11Q8TC12 318 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PIGTQ969N2 578 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 INTS12Q96CB8 462 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NAPGQ99747 312 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 TUBA1CQ9BQE3 449 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ZNF717Q9BY31 904 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 IPPKQ9H8X2 491 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SERHLQ9NQF3 203 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 JKAMPQ9P055 326 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 WHRNQ9P202 907 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CPSF2Q9P2I0 782 aaKnown RBP11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PACSIN3Q9UKS6 424 aa11.82□□□□□ -0.52
TNFRSF1A-207ENST00000535958 DOCK7Q96N67 2140 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 UQCRHLA0A096LP55 91 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CCDC189A1A4V9 331 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PRAMEF25A6NGN4 478 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FOXE1O00358 373 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PGRMC2O15173 223 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ACOX3O15254 700 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CBR3O75828 277 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 RCBTB2O95199 551 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CLDN9O95484 217 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms