RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 DLGAP3O95886 979 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 TP53P04637 393 aaPredicted RBP12.41□□□□□ -0.42
LDLR-203ENST00000535915 HMGN2P05204 90 aaKnown RBP12.41□□□□□ -0.42
LDLR-203ENST00000535915 C8orf89P0DMQ9 161 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 MAGP20916 626 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 FCARP24071 287 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 MMP11P24347 488 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 PKLRP30613 574 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 CDC20Q12834 499 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 GPM6BQ13491 265 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 NCF4Q15080 339 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 GPAT3Q53EU6 434 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 IQCHQ86VS3 1027 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 ACOT4Q8N9L9 421 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 OR4K5Q8NGD3 323 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 OR52E1Q8NGJ3 308 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 OR6T1Q8NGN1 323 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 HERVK_113Q902F9 699 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 MS4A6EQ96DS6 147 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 CHFRQ96EP1 664 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 SLC6A18Q96N87 628 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 MND1Q9BWT6 205 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 ZFR2Q9UPR6 939 aaKnown RBP12.41□□□□□ -0.42
LDLR-203ENST00000535915 KLHL20Q9Y2M5 609 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 LSM2Q9Y333 95 aaKnown RBP12.41□□□□□ -0.42
LDLR-203ENST00000535915 ATG4BQ9Y4P1 393 aa12.41□□□□□ -0.42
LDLR-203ENST00000535915 DOCK8Q8NF50 2099 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 PNMA8CA0A1B0GUJ8 204 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 A0A1W2PR48 441 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 HAT1O14929 419 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 CHRM4P08173 479 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 HIST1H1TP22492 207 aaPredicted RBP12.4□□□□□ -0.42
LDLR-203ENST00000535915 RCVRNP35243 200 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 ANXA11P50995 505 aaKnown RBP12.4□□□□□ -0.42
LDLR-203ENST00000535915 SGCGQ13326 291 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 BHLHB9Q6PI77 547 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 TMEM145Q8NBT3 493 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 GANCQ8TET4 914 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 EFHD2Q96C19 240 aaPredicted RBP12.4□□□□□ -0.42
LDLR-203ENST00000535915 RAB11FIP5Q9BXF6 653 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 MIR1-1HGQ9H1L0 117 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 SLC6A20Q9NP91 592 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 CAB39Q9Y376 341 aaPredicted RBP12.4□□□□□ -0.42
LDLR-203ENST00000535915 GPSM3Q9Y4H4 160 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 SCN2AQ99250 2005 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 DNAH14Q0VDD8 3507 aa12.4□□□□□ -0.42
LDLR-203ENST00000535915 PRKYO43930 277 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 LGI1O95970 557 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 C5AR1P21730 350 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 LSM11P83369 360 aaKnown RBP eCLIP12.4□□□□□ -0.43
LDLR-203ENST00000535915 FUT5Q11128 374 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 COX10Q12887 443 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 HYAL2Q12891 473 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 AGERQ15109 404 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 ZIC1Q15915 447 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 UAP1L1Q3KQV9 507 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 TMEM107Q6UX40 140 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 ZER1Q7Z7L7 766 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 SUN3Q8TAQ9 357 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 CNRIP1Q96F85 164 aaPredicted RBP12.4□□□□□ -0.43
LDLR-203ENST00000535915 CEP19Q96LK0 163 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 TIMM29Q9BSF4 260 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 POLR2J2Q9GZM3 115 aaKnown RBP12.4□□□□□ -0.43
LDLR-203ENST00000535915 QRSL1Q9H0R6 528 aaKnown RBP12.4□□□□□ -0.43
LDLR-203ENST00000535915 SFXN1Q9H9B4 322 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 MAN2C1Q9NTJ4 1040 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 ENTPD4Q9Y227 616 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 ASB4Q9Y574 426 aa12.4□□□□□ -0.43
LDLR-203ENST00000535915 CTDSP2O14595 271 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 MYL12BO14950 172 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 GUCY1B2O75343 617 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 EPPINO95925 133 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 ADH1BP00325 375 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 PSMA1P25786 263 aaKnown RBP12.39□□□□□ -0.43
LDLR-203ENST00000535915 ALDH6A1Q02252 535 aaKnown RBP12.39□□□□□ -0.43
LDLR-203ENST00000535915 DUSP2Q05923 314 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 GNA13Q14344 377 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 GINS1Q14691 196 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 OCLNQ16625 522 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 SMUG1Q53HV7 270 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 C18orf63Q68DL7 685 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 ABHD17CQ6PCB6 329 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 TMEM64Q6YI46 380 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 TRIM69Q86WT6 500 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 YAF2Q8IY57 180 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 FBXL6Q8N531 539 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 ARMC5Q96C12 935 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 PRRC1Q96M27 445 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 TRMT61BQ9BVS5 477 aaKnown RBP12.39□□□□□ -0.43
LDLR-203ENST00000535915 ASPNQ9BXN1 380 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 BTBD1Q9H0C5 482 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 CERS4Q9HA82 394 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 BCL2L10Q9HD36 194 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 PRDM7Q9NQW5 492 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 OBP2AQ9NY56 170 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 GDE1Q9NZC3 331 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 PCDHGB6Q9Y5F9 930 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 A0A1W2PS29 197 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 GRXCR1A8MXD5 290 aa12.39□□□□□ -0.43
LDLR-203ENST00000535915 AIFM1O95831 613 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms