RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 STSP08842 583 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 CHMP24386 653 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 ELAVL4P26378 380 aaKnown RBP12.6□□□□□ -0.39
VPS33B-202ENST00000535906 TSFMP43897 325 aaKnown RBP12.6□□□□□ -0.39
VPS33B-202ENST00000535906 STXBP1P61764 594 aaKnown RBP12.6□□□□□ -0.39
VPS33B-202ENST00000535906 FBXO43Q4G163 708 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 FBXO42Q6P3S6 717 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 TMEM64Q6YI46 380 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 NRROSQ86YC3 692 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 STX19Q8N4C7 294 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 SMRP1Q8NCR6 262 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF675Q8TD23 568 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 RASSF5Q8WWW0 418 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 C16orf58Q96GQ5 468 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 SEMA3GQ9NS98 782 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 TRNAU1APQ9NX07 287 aaKnown RBP12.6□□□□□ -0.39
VPS33B-202ENST00000535906 IMPAD1Q9NX62 359 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 KCNE3Q9Y6H6 103 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 TCRBV21S2A2A0A5A6 115 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 KRBA1A5PL33 1030 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 M0R3H8 397 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 EPPINO95925 133 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 MAGP20916 626 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 GADD45AP24522 165 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 PPP2R1BP30154 601 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 SRP54P61011 504 aaKnown RBP12.59□□□□□ -0.39
VPS33B-202ENST00000535906 ALG11Q2TAA5 492 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 FRMPD2BQ6IN97 320 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 SLC46A3Q7Z3Q1 461 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 MCFD2Q8NI22 146 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 DHRS1Q96LJ7 313 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF681Q96N22 645 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 DACH2Q96NX9 599 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 OR2A14Q96R47 310 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 GDF15Q99988 308 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 MMP27Q9H306 513 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 FTSJ1Q9UET6 329 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 CD207Q9UJ71 328 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 DUSP12Q9UNI6 340 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 ENTPD4Q9Y227 616 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 ZAR1LA6NP61 321 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 NME6O75414 186 aaPredicted RBP12.59□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF888P0CJ79 500 aaPredicted RBP12.59□□□□□ -0.39
VPS33B-202ENST00000535906 ADORA3P0DMS8 318 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 IMPDH2P12268 514 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 GABRG2P18507 467 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 CSNK2A2P19784 350 aaPredicted RBP12.59□□□□□ -0.39
VPS33B-202ENST00000535906 KHKP50053 298 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 CRISP1P54107 249 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 CRISP3P54108 245 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 CDC42P60953 191 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 RPS15AP62244 130 aaKnown RBP12.59□□□□□ -0.39
VPS33B-202ENST00000535906 ST3GAL4Q11206 333 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 PIN1Q13526 163 aaPredicted RBP12.59□□□□□ -0.39
VPS33B-202ENST00000535906 IRF3Q14653 427 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF404Q494X3 552 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 PRRT3Q5FWE3 981 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 DCST1Q5T197 706 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 USP43Q70EL4 1123 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 SNX29P2Q8IUI4 249 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 RBM12BQ8IXT5 1001 aaKnown RBP12.59□□□□□ -0.39
VPS33B-202ENST00000535906 OR9A2Q8NGT5 310 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 MS4A12Q9NXJ0 267 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 ACAD8Q9UKU7 415 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 TMCC3Q9ULS5 477 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 A4GNTQ9UNA3 340 aa12.59□□□□□ -0.39
VPS33B-202ENST00000535906 DSPPQ9NZW4 1301 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 TNFRSF10CO14798 259 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 CTSVO60911 334 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 RPLP0P05388 317 aaKnown RBP12.58□□□□□ -0.4
VPS33B-202ENST00000535906 H1F0P07305 194 aaKnown RBP12.58□□□□□ -0.4
VPS33B-202ENST00000535906 FHP07954 510 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 ALOX5P09917 674 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 TGM1P22735 817 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 POU1F1P28069 291 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 MPIP34949 423 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 MC3RP41968 323 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 PPP5CP53041 499 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 BHLHB9Q6PI77 547 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 ASPGQ86U10 573 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 KRT73Q86Y46 540 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 SLC7A13Q8TCU3 470 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 SFXN5Q8TD22 340 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 PATE1Q8WXA2 126 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 GAL3ST3Q96A11 431 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 SLC22A18Q96BI1 424 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 CRELD1Q96HD1 420 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 KLHL25Q9H0H3 589 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 QRSL1Q9H0R6 528 aaKnown RBP12.58□□□□□ -0.4
VPS33B-202ENST00000535906 REV1Q9UBZ9 1251 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 USP34Q70CQ2 3546 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 SH3D21A4FU49 640 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 METTL15A6NJ78 407 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 LRRC72A6NJI9 287 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 OR10H3O60404 316 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 MPZL2O60487 215 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 PTHP01270 115 aa12.58□□□□□ -0.4
VPS33B-202ENST00000535906 IGFBP1P08833 259 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-202ENST00000535906 POLR2CP19387 275 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-202ENST00000535906 CNR2P34972 360 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms