RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 MIEF1Q9NQG6 463 aa12.72□□□□□ -0.37
TMEM258-203ENST00000535297 PLSCR2Q9NRY7 297 aa12.72□□□□□ -0.37
TMEM258-203ENST00000535297 C1orf109Q9NX04 203 aa12.72□□□□□ -0.37
TMEM258-203ENST00000535297 CNIH4Q9P003 139 aa12.72□□□□□ -0.37
TMEM258-203ENST00000535297 PRODH2Q9UF12 536 aa12.72□□□□□ -0.37
TMEM258-203ENST00000535297 BCAP29Q9UHQ4 241 aa12.72□□□□□ -0.37
TMEM258-203ENST00000535297 FIS1Q9Y3D6 152 aa12.72□□□□□ -0.37
TMEM258-203ENST00000535297 CHCHD2Q9Y6H1 151 aaPredicted RBP12.72□□□□□ -0.37
TMEM258-203ENST00000535297 CCL21O00585 134 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 TP53I11O14683 189 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 CTIFO43310 598 aaKnown RBP12.71□□□□□ -0.37
TMEM258-203ENST00000535297 ZG16O60844 167 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 SEC22BO75396 215 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 BCAS2O75934 225 aaPredicted RBP12.71□□□□□ -0.37
TMEM258-203ENST00000535297 PCSK2P16519 638 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 SOX18P35713 384 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 DNASE1L1P49184 302 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 DCAF7P61962 342 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 C2orf80Q0P641 193 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 FOXO1Q12778 655 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 DUSP8Q13202 625 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 EXOSC7Q15024 291 aaKnown RBP12.71□□□□□ -0.37
TMEM258-203ENST00000535297 KIAA0040Q15053 153 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 RPS6KA2Q15349 733 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 C3AR1Q16581 482 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 TBCELQ5QJ74 424 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 CEP85LQ5SZL2 805 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 ZCCHC23Q6ZST2 131 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 MAMDC2Q7Z304 686 aaPredicted RBP12.71□□□□□ -0.37
TMEM258-203ENST00000535297 TICAM1Q8IUC6 712 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 CCDC116Q8IYX3 515 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 FAM9CQ8IZT9 166 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 CLYBLQ8N0X4 340 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 OR10G3Q8NGC4 313 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 OR52R1Q8NGF1 315 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 OR9A2Q8NGT5 310 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 TWIST2Q8WVJ9 160 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 FCRL1Q96LA6 429 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 SECISBP2Q96T21 854 aaKnown RBP12.71□□□□□ -0.37
TMEM258-203ENST00000535297 CCT7Q99832 543 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 ITPAQ9BY32 194 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 NXF5Q9H1B4 397 aaKnown RBP12.71□□□□□ -0.37
TMEM258-203ENST00000535297 TUBB1Q9H4B7 451 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 ZDHHC11Q9H8X9 412 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 TUBA8Q9NY65 449 aaPredicted RBP12.71□□□□□ -0.37
TMEM258-203ENST00000535297 TAS2R7Q9NYW3 318 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 SH3BGRL2Q9UJC5 107 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 TINAGQ9UJW2 476 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 CNOT11Q9UKZ1 510 aaKnown RBP12.71□□□□□ -0.37
TMEM258-203ENST00000535297 DTX4Q9Y2E6 619 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 TMED5Q9Y3A6 229 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 TRAF6Q9Y4K3 522 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 DNAJC15Q9Y5T4 150 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 NPFFR2Q9Y5X5 522 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 PTGDR2Q9Y5Y4 395 aa12.71□□□□□ -0.37
TMEM258-203ENST00000535297 A1L4Q6 167 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 ANKRD33BA6NCL7 494 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 FAM166BA8MTA8 275 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 PRRG2O14669 202 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 ACOX3O15254 700 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 TM9SF1O15321 606 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 CDC40O60508 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM258-203ENST00000535297 SLITRK5O94991 958 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 CLDN1O95832 211 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 NAGAP17050 411 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 NTSP30990 170 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 MPIP34949 423 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 PTGS2P35354 604 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 PIGAP37287 484 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 EMDP50402 254 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 KCNJ2P63252 427 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 RPP38P78345 283 aaKnown RBP12.7□□□□□ -0.38
TMEM258-203ENST00000535297 MRPS35P82673 323 aaKnown RBP12.7□□□□□ -0.38
TMEM258-203ENST00000535297 TRMT12Q53H54 448 aaKnown RBP12.7□□□□□ -0.38
TMEM258-203ENST00000535297 TNFAIP8L3Q5GJ75 292 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 SH2D4BQ5SQS7 431 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 ARHGAP11AQ6P4F7 1023 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 PAOXQ6QHF9 649 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 LRIG3Q6UXM1 1119 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 RPTNQ6XPR3 784 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 Q6ZSR9 355 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 FGD2Q7Z6J4 655 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 EXOC3L1Q86VI1 746 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 EID3Q8N140 333 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 FAM109AQ8N4B1 249 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 OR52N2Q8NGI0 321 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 OR6Y1Q8NGX8 325 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 OR2T11Q8NH01 316 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 HSPBAP1Q96EW2 488 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 ZNF764Q96H86 408 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-203ENST00000535297 CCDC120Q96HB5 630 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 LCORQ96JN0 433 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-203ENST00000535297 ZIM3Q96PE6 472 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 BBS4Q96RK4 519 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 STMN4Q9H169 189 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-203ENST00000535297 BOKQ9UMX3 212 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-203ENST00000535297 ACTL7BQ9Y614 415 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.7□□□□□ -0.38
TMEM258-203ENST00000535297 ZNF407Q9C0G0 2248 aa12.7□□□□□ -0.38
TMEM258-203ENST00000535297 DNAJC13O75165 2243 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms