RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ABCB1P08183 1280 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-206ENST00000535290 ZSCAN5DPP0CG00 497 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 CETN2P41208 172 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 MMP16P51512 607 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 NRF1Q16656 503 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 CR1LQ2VPA4 569 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 CTU2Q2VPK5 515 aaKnown RBP7.42□□□□□ -1.22
CLIP1-206ENST00000535290 CASC4Q6P4E1 433 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 AAGABQ6PD74 315 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 PAQR3Q6TCH7 311 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 TMIGD1Q6UXZ0 262 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 CHMP1BQ7LBR1 199 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 GPSM1Q86YR5 675 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 UBQLNLQ8IYU4 475 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 FNDC9Q8TBE3 224 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 C10orf105Q8TEF2 133 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 FAM168AQ92567 244 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 TP53INP1Q96A56 240 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 RHBDF1Q96CC6 855 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 F2RL3Q96RI0 385 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 NODALQ96S42 347 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 TRIM2Q9C040 744 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 GRIP2Q9C0E4 1043 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 METTL7AQ9H8H3 244 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 ACTR8Q9H981 624 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 COPS7BQ9H9Q2 264 aaPredicted RBP7.42□□□□□ -1.22
CLIP1-206ENST00000535290 SNX15Q9NRS6 342 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 MOCS1Q9NZB8 636 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 TRMT6Q9UJA5 497 aaKnown RBP7.42□□□□□ -1.22
CLIP1-206ENST00000535290 PTBP2Q9UKA9 531 aaKnown RBP7.42□□□□□ -1.22
CLIP1-206ENST00000535290 SOX13Q9UN79 622 aa7.42□□□□□ -1.22
CLIP1-206ENST00000535290 TMEM89A2RUT3 159 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 RTCAO00442 366 aaKnown RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 LCE2BO14633 110 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 DLX3O60479 287 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 ZIC3O60481 467 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 RAMP1O60894 148 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 CLEC3AO75596 197 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 AQP8O94778 261 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 HAUS5O94927 633 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 C1GALT1C1LP0DN25 315 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 ALOX15P16050 662 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 CREB1P16220 341 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 ATP5A1P25705 553 aaKnown RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 ABCD3P28288 659 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 SSTR4P31391 388 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 MAGEA1P43355 309 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 RGS4P49798 205 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 SUCLG1P53597 346 aaKnown RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 PGGT1BP53609 377 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 AP1S2P56377 157 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 B3GALT5-AS1P59052 145 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 ACTG1P63261 375 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 RPP38P78345 283 aaKnown RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 PLIN5Q00G26 463 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 SLBPQ14493 270 aaKnown RBP eCLIP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 FGFBP1Q14512 234 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 OASLQ15646 514 aaKnown RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 BCL2A1Q16548 175 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 LRRC8EQ6NSJ5 796 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 SLC30A6Q6NXT4 461 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 SLCO4C1Q6ZQN7 724 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 FAM214BQ7L5A3 538 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 MYO1HQ8N1T3 1032 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 PLD6Q8N2A8 252 aaKnown RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 GPATCH11Q8N954 259 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 ACOT4Q8N9L9 421 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 BANPQ8N9N5 519 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 BBOF1Q8ND07 529 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 SEMA6DQ8NFY4 1073 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 PROX1Q92786 737 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 GCDHQ92947 438 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 ADIPOR1Q96A54 375 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 LINGO1Q96FE5 620 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 ADAD1Q96M93 576 aaKnown RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 NDNQ99608 321 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 TACO1Q9BSH4 297 aaKnown RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 PINK1Q9BXM7 581 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 CACNG6Q9BXT2 260 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 PLSCR4Q9NRQ2 329 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 CISD1Q9NZ45 108 aaKnown RBP7.41□□□□□ -1.22
CLIP1-206ENST00000535290 FBXL2Q9UKC9 423 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 IKZF3Q9UKT9 509 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 MAD1L1Q9Y6D9 718 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 KCNE2Q9Y6J6 123 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 PLCE1Q9P212 2302 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 TRRAPQ9Y4A5 3859 aa7.41□□□□□ -1.22
CLIP1-206ENST00000535290 DPRXA6NFQ7 191 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 OR6C76A6NM76 312 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 B4DXG7 233 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 TMPRSS2O15393 492 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 CDH16O75309 829 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 H2AFYO75367 372 aaKnown RBP7.4□□□□□ -1.22
CLIP1-206ENST00000535290 PRKRAO75569 313 aaKnown RBP7.4□□□□□ -1.22
CLIP1-206ENST00000535290 AIFM1O95831 613 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 TGFAP01135 160 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 CCDC166P0CW27 439 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 CPN2P22792 545 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 CNTFP26441 200 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 SRD5A2P31213 254 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms