RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 C19orf43Q9BQ61 176 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 OSBPL11Q9BXB4 747 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 SLC2A11Q9BYW1 496 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 FRMD8P1Q9BZ68 369 aaPredicted RBP4□□□□□ -1.77
ITGB1-219ENST00000534049 LHPPQ9H008 270 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 MMP27Q9H306 513 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 RHBGQ9H310 441 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 SAV1Q9H4B6 383 aaPredicted RBP4□□□□□ -1.77
ITGB1-219ENST00000534049 OPA3Q9H6K4 179 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 METTL8Q9H825 291 aaKnown RBP4□□□□□ -1.77
ITGB1-219ENST00000534049 DDX31Q9H8H2 851 aaKnown RBP4□□□□□ -1.77
ITGB1-219ENST00000534049 CXorf21Q9HAI6 301 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 CHMP1AQ9HD42 196 aaPredicted RBP4□□□□□ -1.77
ITGB1-219ENST00000534049 ENTPD7Q9NQZ7 604 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 FBXO8Q9NRD0 319 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 GSN-AS1Q9NRJ2 163 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 PLSCR4Q9NRQ2 329 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 SERINC1Q9NRX5 453 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 SETD4Q9NVD3 440 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 SAGE1Q9NXZ1 904 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 IFT80Q9P2H3 777 aaPredicted RBP4□□□□□ -1.77
ITGB1-219ENST00000534049 MORF4L1Q9UBU8 362 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 POLLQ9UGP5 575 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 NDRG3Q9UGV2 375 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 CD207Q9UJ71 328 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 KCNG2Q9UJ96 466 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 ZNF229Q9UJW7 825 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 PSMD13Q9UNM6 376 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 LIPT1Q9Y234 373 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 AP4B1Q9Y6B7 739 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 ZNF609O15014 1411 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 RFX7Q2KHR2 1363 aa4□□□□□ -1.77
ITGB1-219ENST00000534049 ZNF646O15015 1829 aaPredicted RBP4□□□□□ -1.77
ITGB1-219ENST00000534049 TCHHQ07283 1943 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 CCDC88AQ3V6T2 1871 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 MKI67P46013 3256 aaKnown RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 SLC15A5A6NIM6 579 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 E5RI56 91 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 H3BMQ9 156 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 KPNA3O00505 521 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 CLDN4O14493 209 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 CTDSP2O14595 271 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 ITGB1BP1O14713 200 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 PHYHO14832 338 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 OGTO15294 1046 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 NUPL2O15504 423 aaKnown RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 ADAM12O43184 909 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 B4GAT1O43505 415 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 SGCEO43556 437 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 EDF1O60869 148 aaKnown RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 KERAO60938 352 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 ZNF780AO75290 641 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 NDUFS6O75380 124 aaKnown RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 STX11O75558 287 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 PPP1R3DO95685 299 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 HSPA4LO95757 839 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 MBP02144 154 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 DNTTP04053 509 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 ANXA5P08758 320 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 CSF1P09603 554 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 COX5BP10606 129 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 MLNP12872 115 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 IL7P13232 177 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 CBR1P16152 277 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 ZNF8P17098 575 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 HLA-DPA1P20036 260 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 TAC1P20366 129 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 ZP3P21754 424 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 KCNA5P22460 613 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 PTBP1P26599 531 aaKnown RBP eCLIP3.99□□□□□ -1.772e-10■■■□□ 15.4
ITGB1-219ENST00000534049 CRABP1P29762 137 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 HNRNPH3P31942 346 aaKnown RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 DCTDP32321 178 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 TMPOP42166 694 aaKnown RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 OR1G1P47890 313 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 CASP4P49662 377 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 CLCN5P51795 746 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 AKR1D1P51857 326 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 NDUFA8P51970 172 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 PPP5CP53041 499 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 PRKAA2P54646 552 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 AQP4P55087 323 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 PRMT2P55345 433 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 ERVK-8P63133 956 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 CD300CQ08708 224 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 TNK1Q13470 666 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 TRAM2Q15035 370 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 PDK4Q16654 411 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 TIGD6Q17RP2 521 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 KNOP1Q1ED39 458 aaKnown RBP3.99□□□□□ -1.77
ITGB1-219ENST00000534049 UGT3A2Q3SY77 523 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 ATP13A5Q4VNC0 1218 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 ZNF484Q5JVG2 852 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 CBWD5Q5RIA9 395 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 PDZK1Q5T2W1 519 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 WDR73Q6P4I2 378 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 RFWD3Q6PCD5 774 aa3.99□□□□□ -1.77
ITGB1-219ENST00000534049 DCUN1D2Q6PH85 259 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms