RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 DSPPQ9NZW4 1301 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 TMEM131Q92545 1883 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 CRYBG3Q68DQ2 2970 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 PRAMEF33A0A0G2JMD5 474 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 SH3D21A4FU49 640 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 PRAMEF25A6NGN4 478 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 OR5K4A6NMS3 321 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 K7ESF4 209 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 ERVH48-1M5A8F1 160 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 RTCAO00442 366 aaKnown RBP9.11□□□□□ -0.95
CHKA-207ENST00000533728 HMGN4O00479 90 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 FAAHO00519 579 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 CASC3O15234 703 aaKnown RBP9.11□□□□□ -0.95
CHKA-207ENST00000533728 SLC22A1O15245 554 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 B4GAT1O43505 415 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 PRAMEF10O60809 474 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 SLITRK5O94991 958 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 DIRAS1O95057 198 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 CCNB2O95067 398 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 GABARAPO95166 117 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 GADD45GO95257 159 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 ATE1O95260 518 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 EGFP01133 1207 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 IGLV3-19P01714 112 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 CHRM5P08912 532 aaPredicted RBP9.11□□□□□ -0.95
CHKA-207ENST00000533728 CSNK2A2P19784 350 aaPredicted RBP9.11□□□□□ -0.95
CHKA-207ENST00000533728 MATN1P21941 496 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 AQP1P29972 269 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 PEBP1P30086 187 aaKnown RBP9.11□□□□□ -0.95
CHKA-207ENST00000533728 SOX9P48436 509 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 ALDH9A1P49189 494 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 CDH12P55289 794 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 SEC13P55735 322 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 EMX1Q04741 257 aaPredicted RBP9.11□□□□□ -0.95
CHKA-207ENST00000533728 RGS1Q08116 209 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 NFATC3Q12968 1075 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 LRRC32Q14392 662 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 NPTX1Q15818 432 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 NDUFA9Q16795 377 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 EXOC3L2Q2M3D2 409 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 C11orf91Q3C1V1 193 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 SPDYE7PQ495Y7 208 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 MANEAQ5SRI9 462 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 NDUFAF5Q5TEU4 345 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 UBE2UQ5VVX9 321 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 ZNF793Q6ZN11 406 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 ADCK2Q7Z695 626 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 WDR5BQ86VZ2 330 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 AMIGO1Q86WK6 493 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 PAQR7Q86WK9 346 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 SLC5A8Q8N695 610 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 BPIFB6Q8NFQ5 453 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 OR5AK3PQ8NH89 298 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 RHOXF1Q8NHV9 184 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 FAR1Q8WVX9 515 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 RSC1A1Q92681 617 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 EXOSC8Q96B26 276 aaKnown RBP9.11□□□□□ -0.95
CHKA-207ENST00000533728 TMEM19Q96HH6 336 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 BBS4Q96RK4 519 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 SEMA4CQ9C0C4 833 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 AICDAQ9GZX7 198 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 GLIPR2Q9H4G4 154 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 FGF22Q9HCT0 170 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 PAK1IP1Q9NWT1 392 aaPredicted RBP9.11□□□□□ -0.95
CHKA-207ENST00000533728 TEX10Q9NXF1 929 aaPredicted RBP9.11□□□□□ -0.95
CHKA-207ENST00000533728 NTMQ9P121 344 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 PHF11Q9UIL8 331 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 CES1P1Q9UKY3 287 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 ENTPD4Q9Y227 616 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 LIPT1Q9Y234 373 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 TESMINQ9Y4I5 508 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 PCDHGA10Q9Y5H3 936 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 SNX8Q9Y5X2 465 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 DGKBQ9Y6T7 804 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 ADGRG4Q8IZF6 3080 aa9.11□□□□□ -0.95
CHKA-207ENST00000533728 PDZD2O15018 2839 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 CELSR2Q9HCU4 2923 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 A0A0G2JPF8 293 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 OR2A25A4D2G3 310 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 A6NCN8 305 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 URADA6NGE7 173 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 HNRNPCL2B2RXH8 293 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 HNRNPCL3B7ZW38 293 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 SYT5O00445 386 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 EMC8O43402 210 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 ERI3O43414 337 aaKnown RBP9.1□□□□□ -0.95
CHKA-207ENST00000533728 LATO43561 262 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 FAM20BO75063 409 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 WBP4O75554 376 aaKnown RBP9.1□□□□□ -0.95
CHKA-207ENST00000533728 RECKO95980 971 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 AGR2O95994 175 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 BCL10O95999 233 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 FHP07954 510 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 HNRNPCL4P0DMR1 293 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 SMIM10L1P0DMW3 83 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 ACADMP11310 421 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 F3P13726 295 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 GABRB1P18505 474 aa9.1□□□□□ -0.95
CHKA-207ENST00000533728 ZNF10P21506 573 aaPredicted RBP9.1□□□□□ -0.95
CHKA-207ENST00000533728 ELAVL4P26378 380 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms