RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 E9PBE3 544 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 KLHL41O60662 606 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 TROVE2P10155 538 aaKnown RBP eCLIP11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 COX7A2P14406 83 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 NT5EP21589 574 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 PSMD7P51665 324 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 WNT3P56703 355 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 PHC1P78364 1004 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 HPCAP84074 193 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 DUSP8Q13202 625 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 FAM9CQ8IZT9 166 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 ARMC10Q8N2F6 343 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 TESCQ96BS2 214 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 VMP1Q96GC9 406 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 NPAS2Q99743 824 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 TMEM120AQ9BXJ8 343 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 DPY30Q9C005 99 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 ZNF385DQ9H6B1 395 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 CLMPQ9H6B4 373 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 ZNF552Q9H707 407 aaPredicted RBP11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 SH3BP4Q9P0V3 963 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 ENTPD4Q9Y227 616 aa11.83□□□□□ -0.51
RPUSD4-208ENST00000533628 A0A0G2JND7 137 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 TMEM200CA6NKL6 621 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 PRKNO60260 465 aaPredicted RBP11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 SCN2BO60939 215 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 GPX3P22352 226 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 MPIP34949 423 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 SOX11P35716 441 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 CD97P48960 835 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 PGDP52209 483 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 ZNF267Q14586 743 aaPredicted RBP11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 CPTPQ5TA50 214 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 FHL5Q5TD97 284 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 JMJD6Q6NYC1 403 aaPredicted RBP11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 GALNT12Q8IXK2 581 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 ZNF615Q8N8J6 731 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 EXD3Q8N9H8 876 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 SIMC1Q8NDZ2 872 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 ADCY4Q8NFM4 1077 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 OR9A2Q8NGT5 310 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 BRIX1Q8TDN6 353 aaKnown RBP11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 BBS4Q96RK4 519 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 OR8D2Q9GZM6 311 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 ACSS1Q9NUB1 689 aaPredicted RBP11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 GIMAP4Q9NUV9 329 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 MAPRE3Q9UPY8 281 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 ERVK-19Q9WJR5 959 aa11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 PCDHGA9Q9Y5G4 932 aaKnown RBP11.83□□□□□ -0.52
RPUSD4-208ENST00000533628 KMT2BQ9UMN6 2715 aaPredicted RBP11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 A6NL46 340 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 PDPK1O15530 556 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 CBX7O95931 251 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 LYNP07948 512 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 PABPC4LP0CB38 370 aaKnown RBP11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 ITGA3P26006 1051 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 NME5P56597 212 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 SLC37A1P57057 533 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 MLC1Q15049 377 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 TRMT12Q53H54 448 aaKnown RBP11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 ZNF551Q7Z340 670 aaPredicted RBP11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 OR8J2Q8NGG1 315 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 C10orf82Q8WW14 230 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 BHLHE41Q9C0J9 482 aaPredicted RBP11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 DENND2DQ9H6A0 471 aaPredicted RBP11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 ZIM2Q9NZV7 527 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 ERVK-11Q9UQG0 969 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 COPG1Q9Y678 874 aaKnown RBP11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 EPG5Q9HCE0 2579 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 TRBV11-1A0A0K0K1C0 115 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 H0Y3Z8 333 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 K7EM74 188 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 PLOD2O00469 737 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 IFI6P09912 130 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 SSTR4P31391 388 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 RASSF2P50749 326 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 ATP4BP51164 291 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 CLCN2P51788 898 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 NCBP2P52298 156 aaKnown RBP eCLIP11.82□□□□□ -0.529e-7■■■■□ 23.4
RPUSD4-208ENST00000533628 AP2B1P63010 937 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 B3GNTL1Q67FW5 361 aaPredicted RBP11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 VWA5B2Q8N398 1253 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 NATD1Q8N6N6 113 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 OR8K3Q8NH51 312 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 WDR60Q8WVS4 1066 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 ART5Q96L15 291 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 SMAD5Q99717 465 aaKnown RBP11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 DUSP26Q9BV47 211 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 CNPPD1Q9BV87 410 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 GPR83Q9NYM4 423 aa11.82□□□□□ -0.52
RPUSD4-208ENST00000533628 C9JVG2 144 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 MAN1A2O60476 641 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 PLOD3O60568 738 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 ENTPD5O75356 428 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 PDGFAP04085 211 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 HNRNPCP07910 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 FAM87AP0C7U9 286 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 CD1EP15812 388 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 EFNA1P20827 205 aaPredicted RBP11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 NTSP30990 170 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms