RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CDCP1Q9H5V8 836 aa16.22■□□□□ 0.19
NXF1-216ENST00000533499 CXorf36Q9H7Y0 433 aa16.22■□□□□ 0.19
NXF1-216ENST00000533499 MRGBPQ9NV56 204 aa16.22■□□□□ 0.19
NXF1-216ENST00000533499 TAS2R9Q9NYW1 312 aa16.22■□□□□ 0.19
NXF1-216ENST00000533499 ZNF223Q9UK11 482 aaPredicted RBP16.22■□□□□ 0.19
NXF1-216ENST00000533499 LOC100653049A0A140TA62 436 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 C2orf92A0A1B0GVN3 265 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 WWP2O00308 870 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 RFXANKO14593 260 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 COQ9O75208 318 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 BCAS2O75934 225 aaPredicted RBP16.21■□□□□ 0.19
NXF1-216ENST00000533499 KRT34O76011 436 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 SLITRK5O94991 958 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 IGKV3-11P04433 115 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 SNRPB2P08579 225 aaKnown RBP16.21■□□□□ 0.19
NXF1-216ENST00000533499 CAPN3P20807 821 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 S1PR1P21453 382 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 CHI3L1P36222 383 aaPredicted RBP16.21■□□□□ 0.19
NXF1-216ENST00000533499 POLE2P56282 527 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 PRR5P85299 388 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 RCAN2Q14206 197 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 MYBPC3Q14896 1274 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 MLC1Q15049 377 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 NNATQ16517 81 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 ABHD17BQ5VST6 288 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 AGAP7PQ5VUJ5 663 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 TCTN3Q6NUS6 607 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 RPS19BP1Q86WX3 136 aaKnown RBP16.21■□□□□ 0.19
NXF1-216ENST00000533499 SNX32Q86XE0 403 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 C9orf40Q8IXQ3 194 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 FDCSPQ8NFU4 85 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 OR5L2Q8NGL0 311 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 C16orf52Q8NHV5 167 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 FBXO30Q8TB52 745 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 JADE3Q92613 823 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 CTHRC1Q96CG8 243 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 AGAP4Q96P64 663 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 NEUROD4Q9HD90 331 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 PRODH2Q9UF12 536 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 TEKT2Q9UIF3 430 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 BTNL2Q9UIR0 455 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 VPS4AQ9UN37 437 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 PPIEQ9UNP9 301 aaKnown RBP16.21■□□□□ 0.19
NXF1-216ENST00000533499 C19orf53Q9UNZ5 99 aaPredicted RBP16.21■□□□□ 0.19
NXF1-216ENST00000533499 CFL2Q9Y281 166 aa16.21■□□□□ 0.19
NXF1-216ENST00000533499 PKD1L2Q7Z442 2459 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 A0A087WV62 115 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 RNF103-CHMP3A0A140T963 221 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 MKRN2OSH3BPM6 223 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 UPK1AO00322 258 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 PLOD2O00469 737 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 PLOD3O60568 738 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 SCN2BO60939 215 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 DCTN3O75935 186 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 F10P00742 488 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 CLPSP04118 112 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 ITGB2P05107 769 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 CDKN2CP42773 168 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 DUSP8Q13202 625 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 MAPRE2Q15555 327 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 MMEL1Q495T6 779 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 WDR53Q7Z5U6 358 aaPredicted RBP16.2■□□□□ 0.18
NXF1-216ENST00000533499 POU5F2Q8N7G0 328 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 ZNF615Q8N8J6 731 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 ANKS4BQ8N8V4 417 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 SNRNP27Q8WVK2 155 aaKnown RBP16.2■□□□□ 0.18
NXF1-216ENST00000533499 FAM120BQ96EK7 910 aaKnown RBP16.2■□□□□ 0.18
NXF1-216ENST00000533499 ZNF354BQ96LW1 612 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 CCDC115Q96NT0 180 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 YIPF4Q9BSR8 244 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 ITPAQ9BY32 194 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 SEMA4CQ9C0C4 833 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 WWTR1Q9GZV5 400 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 IL1RL2Q9HB29 575 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 SIRT3Q9NTG7 399 aaPredicted RBP16.2■□□□□ 0.18
NXF1-216ENST00000533499 TMEM45AQ9NWC5 275 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 ZNF639Q9UID6 485 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 NDUFAF1Q9Y375 327 aa16.2■□□□□ 0.18
NXF1-216ENST00000533499 HEMK1Q9Y5R4 338 aaPredicted RBP16.2■□□□□ 0.18
NXF1-216ENST00000533499 A0A1W2PP18 115 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 OR6C76A6NM76 312 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 MAN1A2O60476 641 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 ALPPP05187 535 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 FAM87AP0C7U9 286 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 SOX18P35713 384 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 NR0B1P51843 470 aaKnown RBP16.19■□□□□ 0.18
NXF1-216ENST00000533499 CASP9P55211 416 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 CBX1P83916 185 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 LRRC74AQ0VAA2 488 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 MEP1AQ16819 746 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 CRB2Q5IJ48 1285 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 FHL5Q5TD97 284 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 MSANTD1Q6ZTZ1 278 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 OR2L13Q8N349 312 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 TRIML2Q8N7C3 387 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 OR56A1Q8NGH5 318 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 PSMF1Q92530 271 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 ERP27Q96DN0 273 aa16.19■□□□□ 0.18
NXF1-216ENST00000533499 OTUB1Q96FW1 271 aaPredicted RBP16.19■□□□□ 0.18
NXF1-216ENST00000533499 MS4A4EQ96PG1 132 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms