RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TAS2R7Q9NYW3 318 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 TRPC4Q9UBN4 977 aa17.33■□□□□ 0.37
SMPD1-208ENST00000533123 CCDC187A0A096LP49 1063 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 OR2W5A6NFC9 320 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 PLD2O14939 933 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 CLOCKO15516 846 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 B4GALT2O60909 372 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 LDB3O75112 727 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 FBLP22087 321 aaKnown RBP17.33■□□□□ 0.36
SMPD1-208ENST00000533123 DUSP2Q05923 314 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 C3orf38Q5JPI3 329 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 GCNT6Q5T4J0 391 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 DCAF12Q5T6F0 453 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 TBC1D20Q96BZ9 403 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 CNRIP1Q96F85 164 aaPredicted RBP17.33■□□□□ 0.36
SMPD1-208ENST00000533123 PYURFQ96I23 114 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 AMDHD1Q96NU7 426 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 ULBP3Q9BZM4 244 aa17.33■□□□□ 0.36
SMPD1-208ENST00000533123 CLK4Q9HAZ1 481 aaKnown RBP17.33■□□□□ 0.36
SMPD1-208ENST00000533123 ACOX3O15254 700 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 HBQ1P09105 142 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 PCGF2P35227 344 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 FEN1P39748 380 aaKnown RBP17.32■□□□□ 0.36
SMPD1-208ENST00000533123 ID2Q02363 134 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 VEZF1Q14119 521 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 CEACAM20Q6UY09 585 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 VTCN1Q7Z7D3 282 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 NATD1Q8N6N6 113 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 C11orf65Q8NCR3 313 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 NEUROD4Q9HD90 331 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 SLC22A11Q9NSA0 550 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 PSME2Q9UL46 239 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 SATB2Q9UPW6 733 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 AP4B1Q9Y6B7 739 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 MYOCOSA0A1B0GUC4 107 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 UPK1AO00322 258 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 CPNE3O75131 537 aaKnown RBP17.32■□□□□ 0.36
SMPD1-208ENST00000533123 GCM2O75603 506 aaPredicted RBP17.32■□□□□ 0.36
SMPD1-208ENST00000533123 DDX5P17844 614 aaKnown RBP17.32■□□□□ 0.36
SMPD1-208ENST00000533123 NCBP2P52298 156 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMPD1-208ENST00000533123 SPDYE7PQ495Y7 208 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 PPP4R4Q6NUP7 873 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 ZNF597Q96LX8 424 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 AKIRIN1Q9H9L7 192 aaPredicted RBP17.32■□□□□ 0.36
SMPD1-208ENST00000533123 ACSS1Q9NUB1 689 aaPredicted RBP17.32■□□□□ 0.36
SMPD1-208ENST00000533123 SAMD4AQ9UPU9 718 aaKnown RBP17.32■□□□□ 0.36
SMPD1-208ENST00000533123 SPTBN2O15020 2390 aa17.32■□□□□ 0.36
SMPD1-208ENST00000533123 MEN1O00255 615 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 FGF17O60258 216 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 KRT75O95678 551 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 FHP07954 510 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 RORAP35398 523 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 RAB15P59190 212 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 DCDP81605 110 aaKnown RBP17.31■□□□□ 0.36
SMPD1-208ENST00000533123 VAC14Q08AM6 782 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 FADDQ13158 208 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 EIF3IQ13347 325 aaKnown RBP17.31■□□□□ 0.36
SMPD1-208ENST00000533123 RSPO4Q2I0M5 234 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-208ENST00000533123 NKAIN1Q4KMZ8 207 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 VWA2Q5GFL6 755 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 INTS11Q5TA45 600 aaKnown RBP17.31■□□□□ 0.36
SMPD1-208ENST00000533123 SAXO2Q658L1 398 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 EID3Q8N140 333 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 OR4K14Q8NGD5 310 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 WDR36Q8NI36 951 aaKnown RBP17.31■□□□□ 0.36
SMPD1-208ENST00000533123 NFKBIDQ8NI38 313 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 NEURL3Q96EH8 262 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 MAGIXQ9H6Y5 334 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 ZNF780BQ9Y6R6 833 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 ZNF23P17027 643 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 PRIM2P49643 509 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 XKP51811 444 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 RPS6KA3P51812 740 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 IST1P53990 364 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 BTG2P78543 158 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 MED21Q13503 144 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 ZNF385CQ66K41 422 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-208ENST00000533123 TNFAIP8L2Q6P589 184 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-208ENST00000533123 COX15Q7KZN9 410 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 TMPRSS12Q86WS5 348 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 CCDC116Q8IYX3 515 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 TANKQ92844 425 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 TAAR9Q96RI9 348 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 BBS4Q96RK4 519 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 BDH2Q9BUT1 245 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 C9orf16Q9BUW7 83 aa17.31■□□□□ 0.36
SMPD1-208ENST00000533123 TEX51A0A1B0GUA7 166 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 EI24O14681 340 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 DEAF1O75398 565 aaPredicted RBP17.3■□□□□ 0.36
SMPD1-208ENST00000533123 CST1P01037 141 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 GSTT1P30711 240 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 NTSP30990 170 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 GPC1P35052 558 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 EEF1A2Q05639 463 aaKnown RBP17.3■□□□□ 0.36
SMPD1-208ENST00000533123 SLC13A2Q13183 592 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 SCARB2Q14108 478 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 GK3PQ14409 553 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 LCN10Q6JVE6 187 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 TBPL2Q6SJ96 375 aa17.3■□□□□ 0.36
SMPD1-208ENST00000533123 SZRD1Q7Z422 152 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms