RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ADIPOR1Q96A54 375 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 LRRC39Q96DD0 335 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 TMEM41AQ96HV5 264 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 SECISBP2Q96T21 854 aaKnown RBP11.85□□□□□ -0.51
COPB1-209ENST00000533096 PIGQQ9BRB3 760 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 NXF5Q9H1B4 397 aaKnown RBP11.85□□□□□ -0.51
COPB1-209ENST00000533096 PIGMQ9H3S5 423 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 GALNT9Q9HCQ5 603 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 ZNF226Q9NYT6 803 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 KLRF1Q9NZS2 232 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 PACSIN3Q9UKS6 424 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 IKBKGQ9Y6K9 419 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 FBN3Q75N90 2809 aa11.85□□□□□ -0.51
COPB1-209ENST00000533096 ZNF469Q96JG9 3925 aaPredicted RBP11.84□□□□□ -0.51
COPB1-209ENST00000533096 CXorf49A8MYA2 514 aaPredicted RBP11.84□□□□□ -0.51
COPB1-209ENST00000533096 K7EPI3 171 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 UBXN8O00124 270 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 SIAH2O43255 324 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 CBR3O75828 277 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 CNOT4O95628 575 aaKnown RBP11.84□□□□□ -0.51
COPB1-209ENST00000533096 AIFM1O95831 613 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 TGM6O95932 706 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 CNTFP26441 200 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 BSGP35613 385 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 PIK3CGP48736 1102 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 NR1H2P55055 460 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 CPSF6Q16630 551 aaKnown RBP eCLIP11.84□□□□□ -0.51
COPB1-209ENST00000533096 CDKL4Q5MAI5 379 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 C6orf163Q5TEZ5 329 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 OR5M10Q6IEU7 315 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 RAPH1Q70E73 1250 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 LRRC70Q7Z2Q7 622 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 ZNF550Q7Z398 422 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 NUP54Q7Z3B4 507 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 ZBED8Q8IZ13 594 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 SLC35F6Q8N357 371 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 ZCCHC7Q8N3Z6 543 aaKnown RBP11.84□□□□□ -0.51
COPB1-209ENST00000533096 ZNF615Q8N8J6 731 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 PDPRQ8NCN5 879 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 OR4K14Q8NGD5 310 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 STAG3L4Q8TBR4 150 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 BRINP2Q9C0B6 783 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 ACTR8Q9H981 624 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 LYARQ9NX58 379 aaKnown RBP11.84□□□□□ -0.51
COPB1-209ENST00000533096 NSMCE4AQ9NXX6 385 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 TAS2R10Q9NYW0 307 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 ADGRE2Q9UHX3 823 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 TESMINQ9Y4I5 508 aa11.84□□□□□ -0.51
COPB1-209ENST00000533096 DNAJC13O75165 2243 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 DEFB108AA8MXU0 73 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 PLOD2O00469 737 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 PPM1BO75688 479 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 NID1P14543 1247 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 SERPINB1P30740 379 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 SSTR1P30872 391 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 GALNSP34059 522 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 ARL1P40616 181 aaPredicted RBP11.83□□□□□ -0.52
COPB1-209ENST00000533096 PIK3CBP42338 1070 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 SIRPAP78324 504 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 PHEXP78562 749 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 FUT7Q11130 342 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 GRHL2Q6ISB3 625 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 SLC30A6Q6NXT4 461 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 FAM111BQ6SJ93 734 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 PRSS57Q6UWY2 283 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 LRRC8AQ8IWT6 810 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 UBQLNLQ8IYU4 475 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 WDSUB1Q8N9V3 476 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 MAPK1IP1LQ8NDC0 245 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 ADCY4Q8NFM4 1077 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 PGM2Q96G03 612 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 HS3ST6Q96QI5 342 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 OPN3Q9H1Y3 402 aaPredicted RBP11.83□□□□□ -0.52
COPB1-209ENST00000533096 FETUBQ9UGM5 382 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 EXO1Q9UQ84 846 aaKnown RBP11.83□□□□□ -0.52
COPB1-209ENST00000533096 DTX4Q9Y2E6 619 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 PCDHGA11Q9Y5H2 935 aa11.83□□□□□ -0.52
COPB1-209ENST00000533096 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 A0A0A6YYD5 115 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 A0A1W2PNV4 684 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 LRRC14BA6NHZ5 514 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 RNF212BA8MTL3 300 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 CDH16O75309 829 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 REM1O75628 298 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 TNFSF13O75888 250 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 KLK1P06870 262 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 DEKP35659 375 aaKnown RBP11.82□□□□□ -0.52
COPB1-209ENST00000533096 FEN1P39748 380 aaKnown RBP11.82□□□□□ -0.52
COPB1-209ENST00000533096 MC3RP41968 323 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 RAB10P61026 200 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 EEF1A1P68104 462 aaKnown RBP11.82□□□□□ -0.52
COPB1-209ENST00000533096 DR1Q01658 176 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 FRG1Q14331 258 aaKnown RBP11.82□□□□□ -0.52
COPB1-209ENST00000533096 EXOSC7Q15024 291 aaKnown RBP11.82□□□□□ -0.52
COPB1-209ENST00000533096 EEF1A1P5Q5VTE0 462 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 MRM1Q6IN84 353 aaKnown RBP11.82□□□□□ -0.52
COPB1-209ENST00000533096 ALKBH2Q6NS38 261 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 VWA1Q6PCB0 445 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 AAGABQ6PD74 315 aa11.82□□□□□ -0.52
COPB1-209ENST00000533096 PLEKHM3Q6ZWE6 761 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms