RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SCGB2A1O75556 95 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 OXSR1O95747 527 aaPredicted RBP14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF16P17020 682 aaPredicted RBP14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 PRKCAP17252 672 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 AP2S1P53680 142 aaPredicted RBP14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 NADSYN1Q6IA69 706 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 TMEM173Q86WV6 379 aaPredicted RBP14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 ISG20Q96AZ6 181 aaKnown RBP14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 FBXL20Q96IG2 436 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 FUZQ9BT04 418 aa14.07□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF888P0CJ79 500 aaPredicted RBP14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 TIMP2P16035 220 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 HTR1EP28566 365 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 ERI1Q8IV48 349 aaKnown RBP14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 CRB3Q9BUF7 120 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 SORBS1Q9BX66 1292 aaKnown RBP14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 IGSF5Q9NSI5 407 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 BAIAP2Q9UQB8 552 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 GCGRP47871 477 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 ALG10BQ5I7T1 473 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 LIPIQ6XZB0 460 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 CLECL1Q8IZS7 167 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 OR2L2Q8NH16 312 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 SNIP1Q8TAD8 396 aaKnown RBP14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 PROKR1Q8TCW9 393 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 FUBP1Q96AE4 644 aaKnown RBP14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 CIDECQ96AQ7 238 aaPredicted RBP14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 ETAA1Q9NY74 926 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 TNRC6CQ9HCJ0 1690 aaKnown RBP14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 PHYHO14832 338 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 SEC14L5O43304 696 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 EDIL3O43854 480 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 MPP2Q14168 576 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 CTC1Q2NKJ3 1217 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 SNX29P2Q8IUI4 249 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 OR14L1PQ8NHC6 308 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 SERINC2Q96SA4 455 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC6A17Q9H1V8 727 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 TOR3AQ9H497 397 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 PIGBOS1A0A0B4J2F0 54 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC22A31A6NKX4 558 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 GSCP56915 257 aaPredicted RBP14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 SH3BP2P78314 561 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 CRYZQ08257 329 aaKnown RBP14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 KIR2DS3Q14952 304 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 TMEFF1Q8IYR6 380 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 LMNTD1Q8N9Z9 388 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 OR8J1Q8NGP2 316 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 DDIT4LQ96D03 193 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 C12orf4Q9NQ89 552 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 MARCH5Q9NX47 278 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 RHCEP18577 417 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 MEP1AQ16819 746 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 GRPEL2Q8TAA5 225 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 MOV10Q9HCE1 1003 aaKnown RBP14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 CLEC4EQ9ULY5 219 aa14.06□□□□□ -0.16
PCDHA9-202ENST00000532602 BRINP1O60477 761 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 CER1O95813 267 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 PTGER1P34995 402 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 THBS2P35442 1172 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 MAZP56270 477 aaKnown RBP14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 PTERQ96BW5 349 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 APIPQ96GX9 242 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 BARD1Q99728 777 aaKnown RBP14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 TUBA1CQ9BQE3 449 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 DHDHQ9UQ10 334 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 LAMA4Q16363 1823 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 SCAMP2O15127 329 aaKnown RBP14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 CERS1P27544 350 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 HLA-FP30511 346 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 STEAP4Q687X5 459 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC5A8Q8N695 610 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 IL17RCQ8NAC3 791 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 FN3KQ9H479 309 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 HSFX1Q9UBD0 423 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 MKLN1Q9UL63 735 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 RNF6Q9Y252 685 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 NOP16Q9Y3C1 178 aaKnown RBP14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 A0A0G2JPF8 293 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 DRGXA6NNA5 263 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 HNRNPCL3B7ZW38 293 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 APOL3O95236 402 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 ITGBL1O95965 494 aaPredicted RBP14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 SCGB1D2O95969 90 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 HNRNPCL4P0DMR1 293 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 RGRP47804 291 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 ERVPABLB-1P60509 514 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 CCDC106Q9BWC9 280 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 ERVK-18Q9QC07 812 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 SARDHQ9UL12 918 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 KCNIP3Q9Y2W7 256 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 SGK494L7N484 410 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 ATE1O95260 518 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 CLIC3O95833 236 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 GSTT2P0CG29 244 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 UGT2B10P36537 528 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 RBMXP38159 391 aaKnown RBP14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 NR0B2Q15466 257 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 HMBOX1Q6NT76 420 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms