RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SSX9Q7RTT3 188 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 DPY19L4Q7Z388 723 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 GPR142Q7Z601 462 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 ANKRD37Q7Z713 158 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 EID3Q8N140 333 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 KCNH5Q8NCM2 988 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 FAM83FQ8NEG4 500 aaPredicted RBP3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 OR7A2PQ8NGA2 310 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 OR13C3Q8NGS6 347 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 LILRB4Q8NHJ6 448 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 CD99L2Q8TCZ2 262 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 FAM3CQ92520 227 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 AGAP3Q96P47 875 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 IL12RB2Q99665 862 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 CCDC3Q9BQI4 270 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 NLNQ9BYT8 704 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 PITPNM3Q9BZ71 974 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 TRIM9Q9C026 710 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 GLT8D2Q9H1C3 349 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 A4GALTQ9NPC4 353 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 GDF3Q9NR23 364 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 TUBA8Q9NY65 449 aaPredicted RBP3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 KLRF1Q9NZS2 232 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 ADAM28Q9UKQ2 775 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 FZR1Q9UM11 496 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 OR2W1Q9Y3N9 320 aa3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 PDS5AQ29RF7 1337 aaKnown RBP3.87□□□□□ -1.79
AC055878.1-201ENST00000531858 TRAV25A0A0B4J276 109 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 TMEM272A0A1B0GTI8 110 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 RPS10-NUDT3A0A1W2PQS6 291 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 TTC26A0AVF1 554 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 SHISA7A6NL88 538 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 E5RJQ4 531 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF701M0R085 212 aaPredicted RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 KIAA0513O60268 411 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 DNAJB6O75190 326 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 SORBS2O94875 1100 aaKnown RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 NDUFB8O95169 186 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 CLDN14O95500 239 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 YEATS4O95619 227 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 PRKCGP05129 697 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 H2AFXP16104 143 aaPredicted RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 LHCGRP22888 699 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 U2AF2P26368 475 aaKnown RBP eCLIP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 ANXA13P27216 316 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 LAP3P28838 519 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 ALDH1B1P30837 517 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 CRYBB2P43320 205 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 MAGEA8P43361 318 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 STARP49675 285 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 CRYBB1P53674 252 aaPredicted RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 INHBEP58166 350 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 PHEXP78562 749 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 BST2Q10589 180 aaKnown RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 KLF5Q13887 457 aaPredicted RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 PTGR1Q14914 329 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF699Q32M78 642 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 SNAI3Q3KNW1 292 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 LSM12Q3MHD2 195 aaKnown RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 XKR6Q5GH73 641 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 C10orf120Q5SQS8 335 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 C10orf25Q5T742 122 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 TMEM107Q6UX40 140 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF562Q6V9R5 426 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 SLC24A5Q71RS6 500 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 FCRLAQ7L513 359 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 PIWIL4Q7Z3Z4 852 aaKnown RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 CTU1Q7Z7A3 348 aaKnown RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 SCD5Q86SK9 330 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 SATL1Q86VE3 508 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 TMEM219Q86XT9 240 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 VRK3Q8IV63 474 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 ZC3H3Q8IXZ2 948 aaKnown RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 MICU2Q8IYU8 434 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 OFCC1Q8IZS5 231 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 KLHDC1Q8N7A1 406 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 MAPKAPK5-AS1Q8N8E1 139 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 OR2T12Q8NG77 320 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 OR4D5Q8NGN0 318 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 SLC38A4Q969I6 547 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 SGK3Q96BR1 496 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 NXPE2Q96DL1 559 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 SCRN2Q96FV2 425 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 HMCESQ96FZ2 354 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF274Q96GC6 653 aaPredicted RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 PRRC1Q96M27 445 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 C17orf77Q96MU5 243 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF385AQ96PM9 386 aaKnown RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 UHRF2Q96PU4 802 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 ERGIC2Q96RQ1 377 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 CCNL2Q96S94 520 aaPredicted RBP3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 CSF3RQ99062 836 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 RIT2Q99578 217 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 CITED1Q99966 193 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 TUBA1CQ9BQE3 449 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 BPIFA3Q9BQP9 254 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 BLZF1Q9H2G9 400 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 R3HDMLQ9H3Y0 253 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 RGCCQ9H4X1 137 aa3.86□□□□□ -1.79
AC055878.1-201ENST00000531858 GEMIN7Q9H840 131 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms