RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 SFXN1Q9H9B4 322 aa15.88■□□□□ 0.13
VPS26B-206ENST00000531741 KCNK12Q9HB15 430 aa15.88■□□□□ 0.13
VPS26B-206ENST00000531741 ZDHHC4Q9NPG8 344 aa15.88■□□□□ 0.13
VPS26B-206ENST00000531741 IMP3Q9NV31 184 aaKnown RBP15.88■□□□□ 0.13
VPS26B-206ENST00000531741 TESQ9UGI8 421 aaKnown RBP15.88■□□□□ 0.13
VPS26B-206ENST00000531741 ZFR2Q9UPR6 939 aaKnown RBP15.88■□□□□ 0.13
VPS26B-206ENST00000531741 SLC17A4Q9Y2C5 497 aa15.88■□□□□ 0.13
VPS26B-206ENST00000531741 CKAP5Q14008 2032 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 ANTXRLA6NF34 631 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 ZNF670-ZNF695F2Z2N8 137 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 ASNA1O43681 348 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 PRKYO43930 277 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 HBQ1P09105 142 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 DEFA1P59665 94 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 DEFA3P59666 94 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 CEBPEQ15744 281 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 SYT14P1Q58G82 188 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 VITQ6UXI7 678 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 ADGRD2Q7Z7M1 963 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 MRGPREQ86SM8 312 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 HPS1Q92902 700 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 CNRIP1Q96F85 164 aaPredicted RBP15.87■□□□□ 0.13
VPS26B-206ENST00000531741 SLC30A2Q9BRI3 323 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 C1QTNF2Q9BXJ5 285 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 SLC6A20Q9NP91 592 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 TVP23BQ9NYZ1 205 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 PRKAG2Q9UGJ0 569 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 KLHL3Q9UH77 587 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 CES1P1Q9UKY3 287 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 KLHL20Q9Y2M5 609 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 IRGMA1A4Y4 181 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 HYKKA2RU49 373 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 PDZK1P1A8MUH7 402 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 C4orf51C9J302 202 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 ERI3O43414 337 aaKnown RBP15.87■□□□□ 0.13
VPS26B-206ENST00000531741 TPST2O60704 377 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 HMGN2P05204 90 aaKnown RBP15.87■□□□□ 0.13
VPS26B-206ENST00000531741 CEACAM5P06731 702 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 CKMT1AP12532 417 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 ALOX12P18054 663 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 GTF2E2P29084 291 aaKnown RBP15.87■□□□□ 0.13
VPS26B-206ENST00000531741 SOX3P41225 446 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 SEPHS1P49903 392 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 SMSP52788 366 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 GINS1Q14691 196 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 PPP2R2DQ66LE6 453 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 SLC48A1Q6P1K1 146 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 CLIP4Q8N3C7 705 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 HDDC3Q8N4P3 179 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 ST13P5Q8NFI4 369 aaPredicted RBP15.87■□□□□ 0.13
VPS26B-206ENST00000531741 OR52E1Q8NGJ3 308 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 OR9Q1Q8NGQ5 310 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 ERLEC1Q96DZ1 483 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 SERGEFQ9UGK8 458 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 ENTPD4Q9Y227 616 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 ATG4BQ9Y4P1 393 aa15.87■□□□□ 0.13
VPS26B-206ENST00000531741 MYL12BO14950 172 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 PGRMC2O15173 223 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 TLX2O43763 284 aaPredicted RBP15.86■□□□□ 0.13
VPS26B-206ENST00000531741 KCNK2O95069 426 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 RAB36O95755 333 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 AIFM1O95831 613 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 PAK4O96013 591 aaPredicted RBP15.86■□□□□ 0.13
VPS26B-206ENST00000531741 DNTTP04053 509 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 TMED10P49755 219 aaKnown RBP15.86■□□□□ 0.13
VPS26B-206ENST00000531741 RPS21P63220 83 aaKnown RBP15.86■□□□□ 0.13
VPS26B-206ENST00000531741 PRR5P85299 388 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 LASP1Q14847 261 aaKnown RBP15.86■□□□□ 0.13
VPS26B-206ENST00000531741 UAP1L1Q3KQV9 507 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 KLHL22Q53GT1 634 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 C2orf27AQ580R0 203 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 C3orf38Q5JPI3 329 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 TANGO2Q6ICL3 276 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 IQCHQ86VS3 1027 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 PHC2Q8IXK0 858 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 OR2L3Q8NG85 312 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 OR8K5Q8NH50 307 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 HTRA1Q92743 480 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 CHFRQ96EP1 664 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 ZNF582Q96NG8 517 aaPredicted RBP15.86■□□□□ 0.13
VPS26B-206ENST00000531741 WDFY2Q96P53 400 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 SDHCQ99643 169 aaPredicted RBP15.86■□□□□ 0.13
VPS26B-206ENST00000531741 CNPPD1Q9BV87 410 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 POLR2J2Q9GZM3 115 aaKnown RBP15.86■□□□□ 0.13
VPS26B-206ENST00000531741 ANKRD19PQ9H560 264 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 SMURF1Q9HCE7 757 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 KCNK6Q9Y257 313 aa15.86■□□□□ 0.13
VPS26B-206ENST00000531741 LAMA2P24043 3122 aaKnown RBP15.86■□□□□ 0.13
VPS26B-206ENST00000531741 SLC35F4A4IF30 521 aa15.85■□□□□ 0.13
VPS26B-206ENST00000531741 WASHC1A8K0Z3 465 aa15.85■□□□□ 0.13
VPS26B-206ENST00000531741 EMC8O43402 210 aa15.85■□□□□ 0.13
VPS26B-206ENST00000531741 PRKRAO75569 313 aaKnown RBP15.85■□□□□ 0.13
VPS26B-206ENST00000531741 F3P13726 295 aa15.85■□□□□ 0.13
VPS26B-206ENST00000531741 CSNK2A2P19784 350 aaPredicted RBP15.85■□□□□ 0.13
VPS26B-206ENST00000531741 IFNGR2P38484 337 aa15.85■□□□□ 0.13
VPS26B-206ENST00000531741 RPS19P39019 145 aaKnown RBP15.85■□□□□ 0.13
VPS26B-206ENST00000531741 RORCP51449 518 aa15.85■□□□□ 0.13
VPS26B-206ENST00000531741 COPZ1P61923 177 aa15.85■□□□□ 0.13
VPS26B-206ENST00000531741 FBXO46Q6PJ61 603 aaPredicted RBP15.85■□□□□ 0.13
VPS26B-206ENST00000531741 WASH2PQ6VEQ5 465 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms