RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 OPTCQ9UBM4 332 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 PACSIN3Q9UKS6 424 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 DSCAMO60469 2012 aa8.4□□□□□ -1.06
NEDD8-206ENST00000531430 ZANQ9Y493 2812 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 A0A1W2PS29 197 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 PLOD2O00469 737 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 PLPP1O14494 284 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 CRLF1O75462 422 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 EEDO75530 441 aaKnown RBP8.39□□□□□ -1.07
NEDD8-206ENST00000531430 CBR3O75828 277 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 TGM6O95932 706 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 ABCB1P08183 1280 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-206ENST00000531430 CT62P0C5K7 136 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 SLC35E2BP0CK96 405 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 SLC35E2P0CK97 266 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 NR2F6P10588 404 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 POU2F1P14859 743 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 CD1DP15813 335 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 EPORP19235 508 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 PTX3P26022 381 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-206ENST00000531430 CNTFP26441 200 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 ABCD3P28288 659 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 DEKP35659 375 aaKnown RBP8.39□□□□□ -1.07
NEDD8-206ENST00000531430 GMPRP36959 345 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 CD79BP40259 229 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 MC3RP41968 323 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 CASP2P42575 452 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 FNTAP49354 379 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 XKP51811 444 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 ARL4CP56559 192 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 ATP6V0D1P61421 351 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 EEF1A1P68104 462 aaKnown RBP8.39□□□□□ -1.07
NEDD8-206ENST00000531430 PHEXP78562 749 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 PDIA2Q13087 525 aaKnown RBP8.39□□□□□ -1.07
NEDD8-206ENST00000531430 TBCCQ15814 346 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 SPRED3Q2MJR0 410 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 EEF1A1P5Q5VTE0 462 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 PPP4R4Q6NUP7 873 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 SLC30A6Q6NXT4 461 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 AAGABQ6PD74 315 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 RAPH1Q70E73 1250 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 NUP54Q7Z3B4 507 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 IFNEQ86WN2 208 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 GALNT12Q8IXK2 581 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 KLHL7Q8IXQ5 586 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 FBXO36Q8NEA4 188 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 OR4K14Q8NGD5 310 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 TMEM171Q8WVE6 324 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 ADIPOR1Q96A54 375 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 TSPAN17Q96FV3 270 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 PGM2Q96G03 612 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 TMEM41AQ96HV5 264 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 SFXN2Q96NB2 322 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 ZFP3Q96NJ6 502 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 NODALQ96S42 347 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 SECISBP2Q96T21 854 aaKnown RBP8.39□□□□□ -1.07
NEDD8-206ENST00000531430 PIGQQ9BRB3 760 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 SLC39A3Q9BRY0 314 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 OSBPL11Q9BXB4 747 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 TRIM31Q9BZY9 425 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 ALG9Q9H6U8 611 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 ACTR8Q9H981 624 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 CXorf21Q9HAI6 301 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 LYARQ9NX58 379 aaKnown RBP8.39□□□□□ -1.07
NEDD8-206ENST00000531430 PTBP2Q9UKA9 531 aaKnown RBP8.39□□□□□ -1.07
NEDD8-206ENST00000531430 TESMINQ9Y4I5 508 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 IKBKGQ9Y6K9 419 aa8.39□□□□□ -1.07
NEDD8-206ENST00000531430 STAB1Q9NY15 2570 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 MED12LQ86YW9 2145 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 HEATR5AQ86XA9 2040 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 A0A1W2PNV4 684 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 DEFB108AA8MXU0 73 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 C16orf97H3BN30 126 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 K7EPI3 171 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 SIAH2O43255 324 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 TMPRSS11DO60235 418 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 CDH16O75309 829 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 REM1O75628 298 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 PPM1BO75688 479 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 SCELO95171 688 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 CLPSP04118 112 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 TP53P04637 393 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-206ENST00000531430 STMN1P16949 149 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 PIK3CGP48736 1102 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 NEK2P51955 445 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 ATP5J2P56134 94 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 POU4F1Q01851 419 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 PLCXD2Q0VAA5 305 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 TNK1Q13470 666 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 CPSF6Q16630 551 aaKnown RBP eCLIP8.38□□□□□ -1.07
NEDD8-206ENST00000531430 VWA1Q6PCB0 445 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 FAM111BQ6SJ93 734 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 SCIMPQ6UWF3 145 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 C20orf204Q6ZNR8 217 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 LRRC70Q7Z2Q7 622 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 BTLAQ7Z6A9 289 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 LAS2Q8IYD9 372 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 ZNF615Q8N8J6 731 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 STAG3L4Q8TBR4 150 aa8.38□□□□□ -1.07
NEDD8-206ENST00000531430 STARD4Q96DR4 205 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms