RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 RCOR2Q8IZ40 523 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 MCOLN2Q8IZK6 566 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 CAMKVQ8NCB2 501 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 ZNF540Q8NDQ6 660 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 OR5L2Q8NGL0 311 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 OR13C4Q8NGS5 318 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 SMARCE1Q969G3 411 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 FOXN4Q96NZ1 517 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 EBNA1BP2Q99848 306 aaKnown RBP6.65□□□□□ -1.34
POLB-216ENST00000530566 PROK2Q9HC23 129 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 FANCFQ9NPI8 374 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 CBLN4Q9NTU7 201 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 SNX8Q9Y5X2 465 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 MRFAP1Q9Y605 127 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 PRSS21Q9Y6M0 314 aa6.65□□□□□ -1.34
POLB-216ENST00000530566 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.65□□□□□ -1.34
POLB-216ENST00000530566 FREM3P0C091 2139 aa6.65□□□□□ -1.35
POLB-216ENST00000530566 ALPK2Q86TB3 2170 aa6.65□□□□□ -1.35
POLB-216ENST00000530566 RYR1P21817 5038 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 FAM237AA0A1B0GTK4 181 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 H7C417 338 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 TRIM3O75382 744 aaPredicted RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 PDE5AO76074 875 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 LRATO95237 230 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 BCL10O95999 233 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 CD48P09326 243 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 APEX1P27695 318 aaKnown RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 AOAHP28039 575 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 GGT5P36269 586 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 MTIF2P46199 727 aaKnown RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 BDKRB1P46663 353 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 MASP1P48740 699 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 CDH11P55287 796 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 C21orf58P58505 322 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 SUMO1P63165 101 aaKnown RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 BSPH1Q075Z2 132 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 SRSF4Q08170 494 aaKnown RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 SLC10A2Q12908 348 aaPredicted RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 CUL4AQ13619 759 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 FGFBP1Q14512 234 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 HERC3Q15034 1050 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 LSM12Q3MHD2 195 aaKnown RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 ICE2Q659A1 982 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 ATL3Q6DD88 541 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 DPY19L2P1Q6NXN4 242 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 UGT2A3Q6UWM9 527 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 SBSNQ6UWP8 590 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 STAC2Q6ZMT1 411 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 VN1R4Q7Z5H5 301 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 GLCCI1Q86VQ1 547 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 IPMKQ8NFU5 416 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 GSDMBQ8TAX9 411 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 SKA2Q8WVK7 121 aaPredicted RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 ATL1Q8WXF7 558 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 SMPDL3AQ92484 453 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 FSD1LQ9BXM9 530 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 UBQLN3Q9H347 655 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 AURKAIP1Q9NWT8 199 aaPredicted RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 SAE1Q9UBE0 346 aaPredicted RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 TAC3Q9UHF0 121 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 PTBP2Q9UKA9 531 aaKnown RBP6.64□□□□□ -1.35
POLB-216ENST00000530566 PPIAL4AQ9Y536 164 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 SLC22A7Q9Y694 548 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 IKBKGQ9Y6K9 419 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 SCN3AQ9NY46 2000 aa6.64□□□□□ -1.35
POLB-216ENST00000530566 TENM2Q9NT68 2774 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 TRBV5-4A0A0C4DH59 114 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 LOC390937A0A1W2PQ73 354 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 PRAMEF25A6NGN4 478 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 SLC22A20A6NK97 555 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 F8W8V4 182 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 G3V4G9 280 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 EIF3FO00303 357 aaPredicted RBP6.63□□□□□ -1.35
POLB-216ENST00000530566 PLOD2O00469 737 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 CCL22O00626 93 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 GALR3O60755 368 aaPredicted RBP6.63□□□□□ -1.35
POLB-216ENST00000530566 RAMP1O60894 148 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 C1orf105O95561 183 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 CRTAMO95727 393 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 APOA4P06727 396 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 PRSS56P0CW18 603 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 KRT15P19012 456 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 CHRM3P20309 590 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 PPP2R1BP30154 601 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 CCR7P32248 378 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 FOXN2P32314 431 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 TTKP33981 857 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 CHN2P52757 468 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 PNLIPRP1P54315 467 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 CDH15P55291 814 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 RPS15AP62244 130 aaKnown RBP6.63□□□□□ -1.35
POLB-216ENST00000530566 GUCY1A3Q02108 690 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 ASPHQ12797 758 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 KBTBD12Q3ZCT8 623 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 DEFB134Q4QY38 66 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 C11orf71Q6IPW1 123 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 C17orf107Q6ZR85 190 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 Q6ZSN1 163 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 CHMP1BQ7LBR1 199 aa6.63□□□□□ -1.35
POLB-216ENST00000530566 YRDCQ86U90 279 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms