RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CLNS1AP54105 237 aaKnown RBP9.98□□□□□ -0.81
NEDD8-205ENST00000527046 MANFP55145 182 aaKnown RBP9.98□□□□□ -0.81
NEDD8-205ENST00000527046 PSG6Q00889 435 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 HSPB3Q12988 150 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 KLF10Q13118 480 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 RCAN2Q14206 197 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 SQLEQ14534 574 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 EBPQ15125 230 aaKnown RBP9.98□□□□□ -0.81
NEDD8-205ENST00000527046 VPS26BQ4G0F5 336 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 CT45A2Q5DJT8 189 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 PAGE3Q5JUK9 113 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 TCTN3Q6NUS6 607 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 JMJD6Q6NYC1 403 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-205ENST00000527046 TMEM107Q6UX40 140 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 ANKRD46Q86W74 232 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 RPS19BP1Q86WX3 136 aaKnown RBP9.98□□□□□ -0.81
NEDD8-205ENST00000527046 TREML1Q86YW5 311 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 MSRB3Q8IXL7 192 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 NATD1Q8N6N6 113 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 OR52R1Q8NGF1 315 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 GTF2H4Q92759 462 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 NTNG2Q96CW9 530 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 ERP27Q96DN0 273 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 FAM120BQ96EK7 910 aaKnown RBP9.98□□□□□ -0.81
NEDD8-205ENST00000527046 ZBED6CLQ96FA7 236 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-205ENST00000527046 C16orf58Q96GQ5 468 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 VSTM2LQ96N03 204 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 LMF1Q96S06 567 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 CCDC106Q9BWC9 280 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 FAM107BQ9H098 131 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 SERHL2Q9H4I8 314 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 TRIM45Q9H8W5 580 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-205ENST00000527046 CCDC167Q9P0B6 97 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 PTGFRNQ9P2B2 879 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 MAP10Q9P2G4 905 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 BTNL2Q9UIR0 455 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 MAPRE3Q9UPY8 281 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 ENTPD4Q9Y227 616 aa9.98□□□□□ -0.81
NEDD8-205ENST00000527046 EML6Q6ZMW3 1958 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 DSPP15924 2871 aaKnown RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 TRBV5-3A0A0A0MS03 114 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 A8MUI8 341 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 ZFAND5O76080 213 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 FAM107AO95990 144 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 IL6P05231 212 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 CD96P40200 585 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 IRX1P78414 480 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 RHDQ02161 417 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 GAB1Q13480 694 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 RPS6KA2Q15349 733 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 DPY19L1Q2PZI1 675 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 GTDC1Q4AE62 458 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 AGKQ53H12 422 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 PIGGQ5H8A4 983 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 ACER2Q5QJU3 275 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 DESI1Q6ICB0 168 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 SLC2A7Q6PXP3 512 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 IGFL3Q6UXB1 125 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 DLEU7Q6UYE1 221 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 NPSR1Q6W5P4 371 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 HSDL2Q6YN16 418 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 GK5Q6ZS86 529 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 WDR53Q7Z5U6 358 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 CPLX4Q7Z7G2 160 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 CLEC1AQ8NC01 280 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 NUBPLQ8TB37 319 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 THAP3Q8WTV1 239 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 VPS50Q96JG6 964 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 BBC3Q96PG8 261 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 OR52E6Q96RD3 313 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 PRPF18Q99633 342 aaKnown RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 DEFB126Q9BYW3 111 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 PAIP1Q9H074 479 aaKnown RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 NXF5Q9H1B4 397 aaKnown RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 GIMAP4Q9NUV9 329 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 ATAD3AQ9NVI7 634 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 FAM120CQ9NX05 1096 aaKnown RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 GPR83Q9NYM4 423 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 TAS2R9Q9NYW1 312 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 SLC25A37Q9NYZ2 338 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 PLA2G3Q9NZ20 509 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 STMN3Q9NZ72 180 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 ARMCX1Q9P291 453 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 MYOTQ9UBF9 498 aa9.97□□□□□ -0.81
NEDD8-205ENST00000527046 GPR55Q9Y2T6 319 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 HEMK1Q9Y5R4 338 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-205ENST00000527046 PRAMEF27A3QJZ7 478 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 OR6C76A6NM76 312 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 CAPN14A8MX76 684 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 WWP2O00308 870 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 FCHO1O14526 889 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 ADAM10O14672 748 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 EMC8O43402 210 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 OR2J2O76002 312 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 CPSF4O95639 269 aaKnown RBP9.96□□□□□ -0.82
NEDD8-205ENST00000527046 WDPCPO95876 746 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 GSNP06396 782 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 ACP2P11117 423 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 DRD5P21918 477 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms