RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 RBCK1Q9BYM8 510 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 ROGDIQ9GZN7 287 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 TSPAN10Q9H1Z9 355 aaPredicted RBP10.13□□□□□ -0.79
NEDD8-204ENST00000526430 LRTM1Q9HBL6 345 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 RIC8BQ9NVN3 520 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 C1orf109Q9NX04 203 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 AHSPQ9NZD4 102 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 LRFN1Q9P244 771 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 BAIAP2L1Q9UHR4 511 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 TEKT2Q9UIF3 430 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 NPIPA1Q9UND3 350 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 RNF6Q9Y252 685 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 L3MBTL1Q9Y468 752 aa10.13□□□□□ -0.79
NEDD8-204ENST00000526430 LOC102723996A0A087X1L8 192 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 IGHV1-45A0A0A0MS14 117 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 MYOCOSA0A1B0GUC4 107 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 FAM90A27PA6NNH2 459 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 ANKRD28O15084 1053 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 HDAC3O15379 428 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 RGS14O43566 566 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 CTNSO60931 367 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 SEC22BO75396 215 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 CRCPO75575 148 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 CDC123O75794 336 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-204ENST00000526430 AIFM1O95831 613 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 RAF1P04049 648 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 BCKDHAP12694 445 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 RNH1P13489 461 aaKnown RBP10.12□□□□□ -0.79
NEDD8-204ENST00000526430 SDC1P18827 310 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 MAOAP21397 527 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 OCA2Q04671 838 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 DUSP2Q05923 314 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 TGM3Q08188 693 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 ACSM2AQ08AH3 577 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 SPIN4Q56A73 249 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 CCNYL2Q5T2Q4 361 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 ACSM2BQ68CK6 577 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 FAM71E1Q6IPT2 247 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 DGAT2L6Q6ZPD8 337 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 LANCL3Q6ZV70 420 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 FGD2Q7Z6J4 655 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 OR4N5Q8IXE1 308 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 DDIASQ8IXT1 998 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 FAM47BQ8NA70 645 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 FAM76AQ8TAV0 307 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 SCMH1Q96GD3 660 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 COX4I2Q96KJ9 171 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 OR52B2Q96RD2 323 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 CCT7Q99832 543 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 EBF4Q9BQW3 602 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 GPATCH1Q9BRR8 931 aaKnown RBP10.12□□□□□ -0.79
NEDD8-204ENST00000526430 YIPF2Q9BWQ6 316 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 EBPLQ9BY08 206 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 UCK2Q9BZX2 261 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 NMRK1Q9NWW6 199 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 C3orf18Q9UK00 162 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 POLR3HQ9Y535 204 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-204ENST00000526430 PCDHA9Q9Y5H5 950 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 USH1CQ9Y6N9 552 aa10.12□□□□□ -0.79
NEDD8-204ENST00000526430 IGHV3-20A0A0C4DH32 117 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 GOLGA8QA0A0J9YX86 632 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 TCRBV16S1A1N1A0A5B0 115 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 GOLGA8OA6NCC3 632 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 GLOD5A6NK44 160 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 GOLGA8NF8WBI6 632 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 PCDH7O60245 1069 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 FGF17O60258 216 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 LDB3O75112 727 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 ATE1O95260 518 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 CHEK2O96017 543 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 ANXA4P09525 319 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-204ENST00000526430 ALDOCP09972 364 aaKnown RBP10.11□□□□□ -0.79
NEDD8-204ENST00000526430 ITGAMP11215 1152 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 ICAM2P13598 275 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 EPHA3P29320 983 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 PPP2R1BP30154 601 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 IDH3AP50213 366 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 GPR143P51810 404 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 MAPK12P53778 367 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 EMP2P54851 167 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 DIO3P55073 304 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 HSD17B7P56937 341 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 TAS2R50P59544 299 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 TRA2BP62995 288 aaKnown RBP10.11□□□□□ -0.79
NEDD8-204ENST00000526430 PPP2R2BQ00005 443 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 TNFRSF17Q02223 184 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 EMX2Q04743 252 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 MPEG1Q2M385 716 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 ZNF750Q32MQ0 723 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 SPDYAQ5MJ70 313 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 IL23RQ5VWK5 629 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 SHEQ5VZ18 495 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 QSOX2Q6ZRP7 698 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 ANKRD37Q7Z713 158 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 CDC20BQ86Y33 519 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 CRLF3Q8IUI8 442 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 RIMKLAQ8IXN7 391 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 LRRC34Q8IZ02 419 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 NFAM1Q8NET5 270 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-204ENST00000526430 GOT1L1Q8NHS2 421 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms