RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 EFNB1P98172 346 aa17.21■□□□□ 0.35
PCDHB18P-201ENST00000524813 RAB40BQ12829 278 aa17.21■□□□□ 0.35
PCDHB18P-201ENST00000524813 C1orf53Q5VUE5 145 aa17.21■□□□□ 0.35
PCDHB18P-201ENST00000524813 Q6ZVL8 140 aa17.21■□□□□ 0.35
PCDHB18P-201ENST00000524813 ZER1Q7Z7L7 766 aa17.21■□□□□ 0.35
PCDHB18P-201ENST00000524813 OR8H1Q8NGG4 311 aa17.21■□□□□ 0.35
PCDHB18P-201ENST00000524813 B3GNT2Q9NY97 397 aa17.21■□□□□ 0.35
PCDHB18P-201ENST00000524813 A4GNTQ9UNA3 340 aa17.21■□□□□ 0.35
PCDHB18P-201ENST00000524813 TRDV1A0A1B0GX56 115 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 SGK494L7N484 410 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 HOXA2O43364 376 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 SOD1P00441 154 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 OR12D1P0DN82 309 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 ETV3P41162 512 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 AGFG1P52594 562 aaKnown RBP17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 CTBP2P56545 445 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 CCDC85BQ15834 202 aaPredicted RBP17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 HIST2H2AA3Q6FI13 130 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 CD200R1LQ6Q8B3 271 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 RASGEF1AQ8N9B8 481 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 CHST14Q8NCH0 376 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 SLC9A6Q92581 669 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 VWCEQ96DN2 955 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 FOPNLQ96NB1 174 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 GPA33Q99795 319 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 EFCAB11Q9BUY7 163 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 MRPL9Q9BYD2 267 aaKnown RBP17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 NARFLQ9H6Q4 476 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 SLAMF7Q9NQ25 335 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 SEC14L3Q9UDX4 400 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 KCNN3Q9UGI6 736 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 GPR52Q9Y2T5 361 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 SPEF1Q9Y4P9 236 aa17.21■□□□□ 0.34
PCDHB18P-201ENST00000524813 SLC5A10A0PJK1 596 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 M0R3H8 397 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 PTBP1P26599 531 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 CDK5Q00535 292 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 COX10Q12887 443 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 CNKSR3Q6P9H4 555 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 DNAJB7Q7Z6W7 309 aaPredicted RBP17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 OR4K5Q8NGD3 323 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 FIBINQ8TAL6 211 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 ARHGAP9Q9BRR9 750 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 TMED9Q9BVK6 235 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 RIOK2Q9BVS4 552 aaKnown RBP17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 ICKQ9UPZ9 632 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 SHISA3A0PJX4 238 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 CSF2RAP15509 400 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 WEE1P30291 646 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 DUSP6Q16828 381 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 TOR2AQ5JU69 321 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 TRILQ7L0X0 811 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 IQCHQ86VS3 1027 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 COMTD1Q86VU5 262 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 MARCH9Q86YJ5 346 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 NATD1Q8N6N6 113 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 ZNF740Q8NDX6 193 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 OR4M2Q8NGB6 313 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 DNAJA4Q8WW22 397 aaPredicted RBP17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 WDR34Q96EX3 536 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 FNDC11Q9BVV2 318 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 CPEB1Q9BZB8 566 aaKnown RBP17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 TBC1D17Q9HA65 648 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 SLC28A3Q9HAS3 691 aa17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 MRPS18AQ9NVS2 196 aaKnown RBP17.2■□□□□ 0.34
PCDHB18P-201ENST00000524813 DOCK6Q96HP0 2047 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 FABP7O15540 132 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 PRODHO43272 600 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 ATG13O75143 517 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 LALBAP00709 142 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 LIMS3P0CW19 117 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 LIMS4P0CW20 117 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 MTNR1AP48039 350 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 SMSP52788 366 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 MANFP55145 182 aaKnown RBP17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 UBE3AQ05086 875 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 RIN1Q13671 783 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 LRRC32Q14392 662 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 SDE2Q6IQ49 451 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 CD300LDQ6UXZ3 194 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 IDO2Q6ZQW0 420 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 IKBIPQ70UQ0 350 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 LHFPL3Q86UP9 236 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 MEX3DQ86XN8 651 aaKnown RBP17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 ZNF461Q8TAF7 563 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 CREB3L1Q96BA8 519 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 AP2M1Q96CW1 435 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 PLA2G12AQ9BZM1 189 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 CLCA2Q9UQC9 943 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 EXOSC1Q9Y3B2 195 aaKnown RBP17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 LTBP2Q14767 1821 aa17.19■□□□□ 0.34
PCDHB18P-201ENST00000524813 A0A1W2PRQ8 180 aa17.18■□□□□ 0.34
PCDHB18P-201ENST00000524813 IRGMA1A4Y4 181 aa17.18■□□□□ 0.34
PCDHB18P-201ENST00000524813 B8ZZF3 427 aa17.18■□□□□ 0.34
PCDHB18P-201ENST00000524813 HMGN4O00479 90 aa17.18■□□□□ 0.34
PCDHB18P-201ENST00000524813 B4GALT2O60909 372 aa17.18■□□□□ 0.34
PCDHB18P-201ENST00000524813 POP4O95707 220 aaKnown RBP17.18■□□□□ 0.34
PCDHB18P-201ENST00000524813 INSL4Q14641 139 aa17.18■□□□□ 0.34
PCDHB18P-201ENST00000524813 ZBTB37Q5TC79 503 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms