RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TNFAIP8L2Q6P589 184 aaPredicted RBP19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 LANCL3Q6ZV70 420 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 NET1Q7Z628 596 aaPredicted RBP19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 HORMAD2Q8N7B1 307 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 TNIP2Q8NFZ5 429 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 PTPMT1Q8WUK0 201 aaPredicted RBP19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 WDR60Q8WVS4 1066 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 ASB9Q96DX5 294 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 C16orf58Q96GQ5 468 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 REXO5Q96IC2 774 aaKnown RBP19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 MS4A4EQ96PG1 132 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 ADAP2Q9NPF8 381 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 BCAP29Q9UHQ4 241 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 CLCA3PQ9Y6N3 262 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 CACNA1AO00555 2505 aa19.96■□□□□ 0.79
R3HCC1-208ENST00000522012 ELOVL7A1L3X0 281 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 SYNDIG1LA6NDD5 238 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 A8MUI8 341 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 DYRK3O43781 588 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 NME6O75414 186 aaPredicted RBP19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 ELAVL1Q15717 326 aaKnown RBP19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 GCNT6Q5T4J0 391 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 MICU2Q8IYU8 434 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 ESX1Q8N693 406 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 OR52R1Q8NGF1 315 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 SLC46A1Q96NT5 459 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 B3GNT4Q9C0J1 378 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 OR51I1Q9H343 314 aa19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 DENND2DQ9H6A0 471 aaPredicted RBP19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 FAF1Q9UNN5 650 aaPredicted RBP19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 PTRH2Q9Y3E5 179 aaKnown RBP19.95■□□□□ 0.78
R3HCC1-208ENST00000522012 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 HRKO00198 91 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 STAMBPO95630 424 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 IFI6P09912 130 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 NCK1P16333 377 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 TCN2P20062 427 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 S1PR1P21453 382 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 DSTNP60981 165 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 FLOT2Q14254 428 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 KPNB1Q14974 876 aaKnown RBP19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 FAM69BQ5VUD6 431 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 ANKRD37Q7Z713 158 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 ZZZ3Q8IYH5 903 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 ENDOVQ8N8Q3 282 aaKnown RBP19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 FBXO30Q8TB52 745 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 CT55Q8WUE5 264 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 JADE3Q92613 823 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 GIMAP5Q96F15 307 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 OTUB1Q96FW1 271 aaPredicted RBP19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 SPATA9Q9BWV2 254 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 SERHL2Q9H4I8 314 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 ZNF639Q9UID6 485 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 ERVK-19Q9WJR5 959 aa19.94■□□□□ 0.78
R3HCC1-208ENST00000522012 ACOT8O14734 319 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 GMNNO75496 209 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 TNFRSF21O75509 655 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 CBX7O95931 251 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 CD63P08962 238 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 SSTR4P31391 388 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 KHKP50053 298 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 ANXA11P50995 505 aaKnown RBP19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 TRAP1Q12931 704 aaKnown RBP19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 ADRM1Q16186 407 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 DHFR2Q86XF0 187 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 PTOV1Q86YD1 416 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 NLGN4XQ8N0W4 816 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 HIPK4Q8NE63 616 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 NLGN4YQ8NFZ3 816 aaPredicted RBP19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 OR5D16Q8NGK9 328 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 RAB8BQ92930 207 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 MAL2Q969L2 176 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 ZNF578Q96N58 590 aaPredicted RBP19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 ACTRT3Q9BYD9 372 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 SNX13Q9Y5W8 968 aa19.93■□□□□ 0.78
R3HCC1-208ENST00000522012 COQ9O75208 318 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 OR12D1P0DN82 309 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 ERFP50548 548 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 ELF3P78545 371 aaPredicted RBP19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 VMACQ2NL98 169 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 SFT2D3Q587I9 215 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 MFSD12Q6NUT3 480 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 ERICH5Q6P6B1 374 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 WDR53Q7Z5U6 358 aaPredicted RBP19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 PTRH1Q86Y79 214 aaKnown RBP19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 XAGE5Q8WWM1 108 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 FIG4Q92562 907 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 DAZLQ92904 295 aaKnown RBP19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 SENP5Q96HI0 755 aaPredicted RBP19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 OR8D2Q9GZM6 311 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 IGHV3-20A0A0C4DH32 117 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 STMND1H3BQB6 276 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 HMGN4O00479 90 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 ARPC2O15144 300 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 BRINP1O60477 761 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 RAD1O60671 282 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 KLF7O75840 302 aaPredicted RBP19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 BCAS2O75934 225 aaPredicted RBP19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 CYC1P08574 325 aa19.92■□□□□ 0.78
R3HCC1-208ENST00000522012 FOLR3P41439 243 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms