RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 GABPAQ06546 454 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 AP1B1Q10567 949 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 TMEM132DQ14C87 1099 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 CFAP221Q4G0U5 840 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 IL23RQ5VWK5 629 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 DUPD1Q68J44 220 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 C8orf74Q6P047 294 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 TMEM53Q6P2H8 277 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF613Q6PF04 617 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 METTL7BQ6UX53 244 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 Q6ZRP5 223 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 CHMP1BQ7LBR1 199 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 GALNTL5Q7Z4T8 443 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 PRUNE1Q86TP1 453 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 LRRTM1Q86UE6 522 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 NUP93Q8N1F7 819 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 CSGALNACT2Q8N6G5 542 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 NUP37Q8NFH4 326 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 OR4C15Q8NGM1 316 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 DQX1Q8TE96 717 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 CKAP2Q8WWK9 683 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 IFT81Q8WYA0 676 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 DNASE1L2Q92874 299 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 ST6GALNAC6Q969X2 333 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 LRRC45Q96CN5 670 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF486Q96H40 463 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 IFT74Q96LB3 600 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 PRICKLE1Q96MT3 831 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 MBOAT7Q96N66 472 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF599Q96NL3 588 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF300Q96RE9 604 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 PIGQQ9BRB3 760 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 ADPGKQ9BRR6 497 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 THUMPD3Q9BV44 507 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 TBC1D10AQ9BXI6 508 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 DDX47Q9H0S4 455 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 BLZF1Q9H2G9 400 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 UBQLN3Q9H347 655 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 EGLN3Q9H6Z9 239 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 C10orf88Q9H8K7 445 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 IARS2Q9NSE4 1012 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 AGPAT5Q9NUQ2 364 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 UBAP1Q9NZ09 502 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 NDUFA13Q9P0J0 144 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 STX18Q9P2W9 335 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 GTF3C4Q9UKN8 822 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 PAIP2BQ9ULR5 123 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 RUVBL2Q9Y230 463 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 FAM32AQ9Y421 112 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 FADS3Q9Y5Q0 445 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 POMT1Q9Y6A1 747 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 CSNK1G3Q9Y6M4 447 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 GAKO14976 1311 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 FAM205AQ6ZU69 1335 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 MYO3BQ8WXR4 1341 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 PLIN4Q96Q06 1357 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 C10orf71Q711Q0 1435 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 SNED1Q8TER0 1413 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 DUOX1Q9NRD9 1551 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 AHDC1Q5TGY3 1603 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 PLCH1Q4KWH8 1693 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 CACNA1SQ13698 1873 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNFX1Q9P2E3 1918 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 BAZ2BQ9UIF8 2168 aaKnown RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ITGB4P16144 1822 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 LAMB2P55268 1798 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 STRCQ7RTU9 1775 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ABCA3Q99758 1704 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 UMODL1Q5DID0 1318 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 SH3PXD2BA1X283 911 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 NKX6-3A6NJ46 265 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 MPTX1A8MV57 137 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 BOLA2-SMG1P6H3BVE0 249 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 H7C423 109 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CCL24O00175 119 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLC1A7O00341 560 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 NTN3O00634 580 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLC30A4O14863 429 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CYTIPO60759 359 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ATP9AO75110 1047 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ENTPD5O75356 428 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ATP5HO75947 161 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CLDN1O95832 211 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 IGHEP01854 428 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 GSTT2P0CG29 244 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 GSTT2BP0CG30 244 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 TROVE2P10155 538 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 KRT3P12035 628 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 TAC1P20366 129 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 MUTP22033 750 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 PRKACGP22612 351 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 PSMB4P28070 264 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CRABP2P29373 138 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 FOXN2P32314 431 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CTNNA1P35221 906 aaKnown RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 PCK1P35558 622 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CCT6AP40227 531 aaKnown RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 SOX3P41225 446 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 PRKCIP41743 596 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms