RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	CASQ1	P31415	396 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	MAGEA6	P43360	314 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	FASLG	P48023	281 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	DRG2	P55039	364 aa	Known RBP	6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	PRAME	P78395	509 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	CRADD	P78560	199 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	KCNJ11	Q14654	390 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	NR1D2	Q14995	579 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	ISX	Q2M1V0	245 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	COL28A1	Q2UY09	1125 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	AMZ1	Q400G9	498 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	BCL7A	Q4VC05	210 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	LYPLAL1	Q5VWZ2	237 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	ANKRD22	Q5VYY1	191 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	LRRC8B	Q6P9F7	803 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	AFTPH	Q6ULP2	937 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	ABRAXAS1	Q6UWZ7	409 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	WASH2P	Q6VEQ5	465 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	SHF	Q7M4L6	423 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	SLC9B2	Q86UD5	537 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	SERPINA9	Q86WD7	417 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	KLHL7	Q8IXQ5	586 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	PIANP	Q8IYJ0	282 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	AVL9	Q8NBF6	648 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	SCCPDH	Q8NBX0	429 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	OR13J1	Q8NGT2	312 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	NAT14	Q8WUY8	206 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	PEX13	Q92968	403 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	MMAB	Q96EY8	250 aa	Predicted RBP	6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	SLC41A2	Q96JW4	573 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	LRFN5	Q96NI6	719 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	DDX47	Q9H0S4	455 aa	Known RBP	6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	RNF14	Q9UBS8	474 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	KCNE2	Q9Y6J6	123 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	IGF2R	P11717	2491 aa		6.55	□□□□□ -1.36
SDCBP-208	ENST00000520228	IGLV3-16	A0A075B6K0	115 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	MAGEB16	A2A368	324 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	SDR42E2	A6NKP2	422 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	OR52A4P	A6NMU1	304 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228		D6RAR5	112 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	GOLGA8M	H3BSY2	632 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	HSPA12A	O43301	675 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	AVIL	O75366	819 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	AP2A2	O94973	939 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CCNDBP1	O95273	360 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CPNE6	O95741	557 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	SCGB1D1	O95968	90 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	GOT2	P00505	430 aa	Known RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	PRSS56	P0CW18	603 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	MLN	P12872	115 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	XRCC1	P18887	633 aa	Predicted RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CD1C	P29017	333 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	FOXN2	P32314	431 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	PPARG	P37231	505 aa	Predicted RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	UBE2I	P63279	158 aa	Known RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	DR1	Q01658	176 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	ACVR1	Q04771	509 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	DMPK	Q09013	629 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	TRAF3	Q13114	568 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	NFE2L1	Q14494	772 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CLPP	Q16740	277 aa	Predicted RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	FASTKD1	Q53R41	847 aa	Known RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CXorf66	Q5JRM2	361 aa	Predicted RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	NKAIN2	Q5VXU1	208 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	ARMC3	Q5W041	872 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CASC4	Q6P4E1	433 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	KLHL24	Q6TFL4	600 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CYP20A1	Q6UW02	462 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CERS6	Q6ZMG9	384 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	ZNF534	Q76KX8	674 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CFAP206	Q8IYR0	622 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CLDN19	Q8N6F1	224 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	MCU	Q8NE86	351 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	OR2L2	Q8NH16	312 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	OR4L1	Q8NH43	312 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	OR10G6	Q8NH81	332 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	SLCO2A1	Q92959	643 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CXorf40B	Q96DE9	158 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	NXPE2	Q96DL1	559 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	ATXN7L3B	Q96GX2	97 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	LINC00615	Q96LM1	132 aa	Predicted RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	ZNF570	Q96NI8	536 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	RUNDC3B	Q96NL0	473 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	SLC25A33	Q9BSK2	321 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	CCM2	Q9BSQ5	444 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	KIFC1	Q9BW19	673 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	ITPA	Q9BY32	194 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	STRADB	Q9C0K7	418 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	KCNN2	Q9H2S1	579 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	VPS37B	Q9H9H4	285 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	XAB2	Q9HCS7	855 aa	Known RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	ASIC3	Q9UHC3	531 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	PCYOX1	Q9UHG3	505 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	ANAPC5	Q9UJX4	755 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	FBXO9	Q9UK97	447 aa	Predicted RBP	6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	ACSL5	Q9ULC5	683 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	WDR37	Q9Y2I8	494 aa		6.54	□□□□□ -1.36
SDCBP-208	ENST00000520228	ADAM18	Q9Y3Q7	739 aa		6.54	□□□□□ -1.36

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