RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 GRHL3Q8TE85 626 aa10.65□□□□□ -0.7
SPIDR-212ENST00000519661 THAP3Q8WTV1 239 aaPredicted RBP10.65□□□□□ -0.7
SPIDR-212ENST00000519661 NR4A3Q92570 626 aa10.65□□□□□ -0.7
SPIDR-212ENST00000519661 SPACA9Q96E40 222 aaPredicted RBP10.65□□□□□ -0.7
SPIDR-212ENST00000519661 HSPBAP1Q96EW2 488 aa10.65□□□□□ -0.7
SPIDR-212ENST00000519661 CNPPD1Q9BV87 410 aa10.65□□□□□ -0.7
SPIDR-212ENST00000519661 MIEF1Q9NQG6 463 aa10.65□□□□□ -0.7
SPIDR-212ENST00000519661 PLSCR2Q9NRY7 297 aa10.65□□□□□ -0.7
SPIDR-212ENST00000519661 ASF1BQ9NVP2 202 aa10.65□□□□□ -0.7
SPIDR-212ENST00000519661 NOP53Q9NZM5 478 aaKnown RBP10.65□□□□□ -0.7
SPIDR-212ENST00000519661 PRODH2Q9UF12 536 aa10.65□□□□□ -0.7
SPIDR-212ENST00000519661 ENTPD4Q9Y227 616 aa10.65□□□□□ -0.7
SPIDR-212ENST00000519661 GPR55Q9Y2T6 319 aaPredicted RBP10.65□□□□□ -0.7
SPIDR-212ENST00000519661 KLF13Q9Y2Y9 288 aaPredicted RBP10.65□□□□□ -0.7
SPIDR-212ENST00000519661 CHCHD2Q9Y6H1 151 aaPredicted RBP10.65□□□□□ -0.7
SPIDR-212ENST00000519661 MYOCOSA0A1B0GUC4 107 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 C2orf92A0A1B0GVN3 265 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 WDR91A4D1P6 747 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 FRG2CA6NGY1 282 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 SCAMP2O15127 329 aaKnown RBP10.64□□□□□ -0.71
SPIDR-212ENST00000519661 ATP8B1O43520 1251 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 ERAL1O75616 437 aaKnown RBP10.64□□□□□ -0.71
SPIDR-212ENST00000519661 GLSO94925 669 aaPredicted RBP10.64□□□□□ -0.71
SPIDR-212ENST00000519661 OR6B1O95007 311 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 RASAL1O95294 804 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 TGDSO95455 350 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 SOX3P41225 446 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 ALDH9A1P49189 494 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 TRMT12Q53H54 448 aaKnown RBP10.64□□□□□ -0.71
SPIDR-212ENST00000519661 PRR30Q53SZ7 412 aaPredicted RBP10.64□□□□□ -0.71
SPIDR-212ENST00000519661 AP1ARQ63HQ0 302 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 FAM111BQ6SJ93 734 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 CCDC116Q8IYX3 515 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 TAGAPQ8N103 731 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 CISD2Q8N5K1 135 aaKnown RBP10.64□□□□□ -0.71
SPIDR-212ENST00000519661 TMEM156Q8N614 296 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 ANKRD42Q8N9B4 389 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 OR7G2Q8NG99 324 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 OR8J2Q8NGG1 315 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 PIWIL2Q8TC59 973 aaKnown RBP10.64□□□□□ -0.71
SPIDR-212ENST00000519661 ASB15Q8WXK1 588 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 ZNF75CPQ92670 426 aaPredicted RBP10.64□□□□□ -0.71
SPIDR-212ENST00000519661 TMEM125Q96AQ2 219 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 TESCQ96BS2 214 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 ZBED6CLQ96FA7 236 aaPredicted RBP10.64□□□□□ -0.71
SPIDR-212ENST00000519661 C5orf34Q96MH7 638 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 BRINP2Q9C0B6 783 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.64□□□□□ -0.71
SPIDR-212ENST00000519661 GLIPR2Q9H4G4 154 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 AKTIPQ9H8T0 292 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 PRM3Q9NNZ6 103 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 TIMMDC1Q9NPL8 285 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 CNIH4Q9P003 139 aa10.64□□□□□ -0.71
SPIDR-212ENST00000519661 HIVEP3Q5T1R4 2406 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 ATP6AP2A0A1C7CYW4 349 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 TRPC5OSA6NMA1 111 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 A8MVJ9 347 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 TCP11X1B4DZS4 312 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 WWP2O00308 870 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 UPK1AO00322 258 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 SDHDO14521 159 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 PEX11AO75192 247 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 ATP6AP2O75787 350 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 CT45A8P0DMV1 189 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 CT45A9P0DMV2 189 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 NT5EP21589 574 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 NTSP30990 170 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 TMED10P49755 219 aaKnown RBP10.63□□□□□ -0.71
SPIDR-212ENST00000519661 PPP2R2AP63151 447 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 FOXO1Q12778 655 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 PTGR1Q14914 329 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 LTB4RQ15722 352 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 DPY19L1Q2PZI1 675 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.63□□□□□ -0.715e-6■□□□□ 9.7
SPIDR-212ENST00000519661 KRTCAP3Q53RY4 240 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 ZNF385BQ569K4 471 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 CT45A2Q5DJT8 189 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 TBCELQ5QJ74 424 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 C6orf163Q5TEZ5 329 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 IL23RQ5VWK5 629 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 FAM180AQ6UWF9 173 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 TMEM64Q6YI46 380 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 C16orf47Q6ZP98 133 aaPredicted RBP10.63□□□□□ -0.71
SPIDR-212ENST00000519661 MDGA2Q7Z553 956 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 ATCAYQ86WG3 371 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 FBXW8Q8N3Y1 598 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 FNDC5Q8NAU1 212 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 OR9A2Q8NGT5 310 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 AGR3Q8TD06 166 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 ACTRT2Q8TDY3 377 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 EXOSC8Q96B26 276 aaKnown RBP10.63□□□□□ -0.71
SPIDR-212ENST00000519661 PPCDCQ96CD2 204 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 TUBGCP3Q96CW5 907 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 ELP4Q96EB1 424 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 SLC35A4Q96G79 324 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 LCORQ96JN0 433 aaPredicted RBP10.63□□□□□ -0.71
SPIDR-212ENST00000519661 TSSK3Q96PN8 268 aa10.63□□□□□ -0.71
SPIDR-212ENST00000519661 LMF2Q9BU23 707 aaKnown RBP10.63□□□□□ -0.71
SPIDR-212ENST00000519661 BHLHE41Q9C0J9 482 aaPredicted RBP10.63□□□□□ -0.71
SPIDR-212ENST00000519661 ZDHHC11Q9H8X9 412 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms