RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 TCTN3Q6NUS6 607 aa17.32■□□□□ 0.36
FAM49B-214ENST00000519540 RBM44Q6ZP01 1051 aaKnown RBP17.32■□□□□ 0.36
FAM49B-214ENST00000519540 FBLIM1Q8WUP2 373 aa17.32■□□□□ 0.36
FAM49B-214ENST00000519540 DGCR14Q96DF8 476 aaKnown RBP17.32■□□□□ 0.36
FAM49B-214ENST00000519540 MS4A4EQ96PG1 132 aa17.32■□□□□ 0.36
FAM49B-214ENST00000519540 PTGFRNQ9P2B2 879 aa17.32■□□□□ 0.36
FAM49B-214ENST00000519540 NDRG4Q9ULP0 352 aaKnown RBP17.32■□□□□ 0.36
FAM49B-214ENST00000519540 LIPT1Q9Y234 373 aa17.32■□□□□ 0.36
FAM49B-214ENST00000519540 SCN2AQ99250 2005 aa17.32■□□□□ 0.36
FAM49B-214ENST00000519540 RDH16O75452 317 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 ATP1B1P05026 303 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 ANXA8P13928 327 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 IL7RP16871 459 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 CRHBPP24387 322 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 EPHA2P29317 976 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 RAB38P57729 211 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 NPRL3Q12980 569 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 ZNF628Q5EBL2 1059 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 LAIR2Q6ISS4 152 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 MFSD12Q6NUT3 480 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 SIMC1Q8NDZ2 872 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 SETD9Q8NE22 299 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 OR4D11Q8NGI4 311 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 SLC35A4Q96G79 324 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 WFDC6Q9BQY6 131 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 IER2Q9BTL4 223 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 RBM38Q9H0Z9 239 aaKnown RBP17.31■□□□□ 0.36
FAM49B-214ENST00000519540 ADNPQ9H2P0 1102 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 RLIMQ9NVW2 624 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 RHCGQ9UBD6 479 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 MUTYHQ9UIF7 546 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 DUXAA6NLW8 204 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 RHPN2P1A8MT19 583 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 A8MVJ9 347 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 E9PQ18 207 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 SEMA7AO75326 666 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 GABRA4P48169 554 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 GFERP55789 205 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 CNPY1Q3B7I2 92 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 TRMT12Q53H54 448 aaKnown RBP17.31■□□□□ 0.36
FAM49B-214ENST00000519540 CDC73Q6P1J9 531 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 MAMSTRQ6ZN01 415 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 COMTD1Q86VU5 262 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 RBM45Q8IUH3 476 aaKnown RBP17.31■□□□□ 0.36
FAM49B-214ENST00000519540 VANGL1Q8TAA9 524 aaPredicted RBP17.31■□□□□ 0.36
FAM49B-214ENST00000519540 ADAMTS15Q8TE58 950 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 PHF10Q8WUB8 498 aaKnown RBP17.31■□□□□ 0.36
FAM49B-214ENST00000519540 TMIGD2Q96BF3 282 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 TGM7Q96PF1 710 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 TRNT1Q96Q11 434 aaKnown RBP17.31■□□□□ 0.36
FAM49B-214ENST00000519540 PSD2Q9BQI7 771 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 GABARAPL3Q9BY60 117 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 RAB33BQ9H082 229 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 GIN1Q9NXP7 522 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 CLCA2Q9UQC9 943 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 GMPPBQ9Y5P6 360 aa17.31■□□□□ 0.36
FAM49B-214ENST00000519540 TP53BP1Q12888 1972 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 A0A1B0GVT2 93 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 CHST10O43529 356 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 MED26O95402 600 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 PPM1FP49593 454 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 EPHA4P54764 986 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 COLEC12Q5KU26 742 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 ATAD3BQ5T9A4 648 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 FHL5Q5TD97 284 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 BORAQ6PGQ7 559 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 TSSK4Q6SA08 328 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 WDR53Q7Z5U6 358 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 LACC1Q8IV20 430 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 SLC16A11Q8NCK7 471 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 ZNF285Q96NJ3 590 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 ALPK1Q96QP1 1244 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 SLC38A1Q9H2H9 487 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 PAPOLBQ9NRJ5 636 aaKnown RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 LRIT1Q9P2V4 623 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 EPHA6Q9UF33 1036 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 C19orf53Q9UNZ5 99 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 HCN4Q9Y3Q4 1203 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 RNF215Q9Y6U7 377 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 HSPE1-MOB4S4R3N1 261 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 NINQ8N4C6 2090 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 A0A0A6YYC8 382 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 IGHV5-51A0A0C4DH38 117 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 TLCD2A6NGC4 264 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 I3L1I5 382 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 EPPINO95925 133 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 AGXTP21549 392 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 ALDH4A1P30038 563 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 RPP38P78345 283 aaKnown RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 IL5RAQ01344 420 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 CDK5R2Q13319 367 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 FAM214AQ32MH5 1076 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 NKAIN2Q5VXU1 208 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 HEPHL1Q6MZM0 1159 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 HMGN2P46Q86SG4 172 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 TSPYL5Q86VY4 417 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 NCSTNQ92542 709 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 ANKRD9Q96BM1 317 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-214ENST00000519540 NIPSNAP1Q9BPW8 284 aa17.3■□□□□ 0.36
FAM49B-214ENST00000519540 ERVMER34-1Q9H9K5 563 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms