RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 RPLP0P6Q8NHW5 317 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 NARS2Q96I59 477 aaKnown RBP12.84□□□□□ -0.35
PABPC1-208ENST00000519004 MED10Q9BTT4 135 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 PAPOLGQ9BWT3 736 aaKnown RBP12.84□□□□□ -0.35
PABPC1-208ENST00000519004 TRPS1Q9UHF7 1281 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 EVPLQ92817 2033 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 ARRDC5A6NEK1 342 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 LOC730098B7Z3J9 87 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 YY2O15391 372 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 POP7O75817 140 aaKnown RBP12.84□□□□□ -0.35
PABPC1-208ENST00000519004 SOX30O94993 753 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 GADD45GO95257 159 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 RECKO95980 971 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 OSMP13725 252 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 HSD3B1P14060 373 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 PPP3CBP16298 524 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 SOX18P35713 384 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 CD79BP40259 229 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 RENBPP51606 427 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 HEPACAMQ14CZ8 416 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 TMUB2Q71RG4 321 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 STK40Q8N2I9 435 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 OR8J1Q8NGP2 316 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 OR56B4Q8NH76 319 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 ADAMTS19Q8TE59 1207 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 SETD7Q8WTS6 366 aaKnown RBP12.84□□□□□ -0.35
PABPC1-208ENST00000519004 ACOT12Q8WYK0 555 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 WDR89Q96FK6 387 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-208ENST00000519004 NPDC1Q9NQX5 325 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-208ENST00000519004 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 TMEM30AQ9NV96 361 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 ZSCAN32Q9NX65 697 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 MARK1Q9P0L2 795 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 PCDHB11Q9Y5F2 797 aa12.84□□□□□ -0.35
PABPC1-208ENST00000519004 TMEM129A0AVI4 362 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 KPNA3O00505 521 aaPredicted RBP12.83□□□□□ -0.35
PABPC1-208ENST00000519004 GABRPO00591 440 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 PRKYO43930 277 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 GUCA1CO95843 209 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 THP07101 528 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 S100PP25815 95 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 RGS4P49798 205 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 UBXN2BQ14CS0 331 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 MFSD14CQ5VZR4 134 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 ZNF660Q6AZW8 331 aaPredicted RBP12.83□□□□□ -0.35
PABPC1-208ENST00000519004 USP53Q70EK8 1073 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 ARMCX2Q7L311 632 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 OAFQ86UD1 273 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 CBLN2Q8IUK8 224 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 TOMM5Q8N4H5 51 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 ZNF285Q96NJ3 590 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 SMOQ99835 787 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 CINPQ9BW66 212 aaPredicted RBP12.83□□□□□ -0.35
PABPC1-208ENST00000519004 CPEB1Q9BZB8 566 aaKnown RBP12.83□□□□□ -0.35
PABPC1-208ENST00000519004 ANKRD19PQ9H560 264 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 CA10Q9NS85 328 aa12.83□□□□□ -0.35
PABPC1-208ENST00000519004 FNDC3AQ9Y2H6 1198 aaKnown RBP12.83□□□□□ -0.35
PABPC1-208ENST00000519004 C2orf92A0A1B0GVN3 265 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 GPR31O00270 319 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 PIRO00625 290 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 SMAD6O43541 496 aaKnown RBP12.83□□□□□ -0.36
PABPC1-208ENST00000519004 FZD7O75084 574 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 PDYNP01213 254 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 S100A8P05109 93 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 CD3GP09693 182 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 ATP5C1P36542 298 aaKnown RBP12.83□□□□□ -0.36
PABPC1-208ENST00000519004 E2F1Q01094 437 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 ILKQ13418 452 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 HTR4Q13639 388 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 SNTB1Q13884 538 aaKnown RBP12.83□□□□□ -0.36
PABPC1-208ENST00000519004 MELKQ14680 651 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 IDNKQ5T6J7 187 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 MARC1Q5VT66 337 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 METTL7BQ6UX53 244 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 PUSL1Q8N0Z8 303 aaKnown RBP12.83□□□□□ -0.36
PABPC1-208ENST00000519004 ZFP82Q8N141 532 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 RTL3Q8N8U3 475 aaKnown RBP12.83□□□□□ -0.36
PABPC1-208ENST00000519004 GANCQ8TET4 914 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 TMED9Q9BVK6 235 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 FN3KQ9H479 309 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 ELAC1Q9H777 363 aaKnown RBP12.83□□□□□ -0.36
PABPC1-208ENST00000519004 STARD7Q9NQZ5 370 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 NTMQ9P121 344 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 RHCGQ9UBD6 479 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 COMMD10Q9Y6G5 202 aa12.83□□□□□ -0.36
PABPC1-208ENST00000519004 AGAP14A8MT82 685 aa12.82□□□□□ -0.36
PABPC1-208ENST00000519004 SULT1C2O00338 296 aa12.82□□□□□ -0.36
PABPC1-208ENST00000519004 PCDH7O60245 1069 aa12.82□□□□□ -0.36
PABPC1-208ENST00000519004 MT-ND4P03905 459 aa12.82□□□□□ -0.36
PABPC1-208ENST00000519004 S100A9P06702 114 aaKnown RBP12.82□□□□□ -0.36
PABPC1-208ENST00000519004 GIPP09681 153 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-208ENST00000519004 ANKRD34CP0C6C1 535 aa12.82□□□□□ -0.36
PABPC1-208ENST00000519004 ZNF3P17036 446 aa12.82□□□□□ -0.36
PABPC1-208ENST00000519004 DRD5P21918 477 aa12.82□□□□□ -0.36
PABPC1-208ENST00000519004 ZNF140P52738 457 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-208ENST00000519004 MVDP53602 400 aa12.82□□□□□ -0.36
PABPC1-208ENST00000519004 TNFRSF17Q02223 184 aa12.82□□□□□ -0.36
PABPC1-208ENST00000519004 SOX4Q06945 474 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-208ENST00000519004 TMEM132BQ14DG7 1078 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms