RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 NEUROD4Q9HD90 331 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 MMP25Q9NPA2 562 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 PTGFRNQ9P2B2 879 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 BCAP29Q9UHQ4 241 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 BTNL2Q9UIR0 455 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 ERVK-19Q9WJR5 959 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 CAPN7Q9Y6W3 813 aa12.09□□□□□ -0.47
PABPC1-205ENST00000518196 A0A087WV62 115 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 OR6C76A6NM76 312 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 PLOD3O60568 738 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 SCN2BO60939 215 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 SERPINA7P05543 415 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 ABCB1P08183 1280 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-205ENST00000518196 SNRPB2P08579 225 aaKnown RBP12.08□□□□□ -0.48
PABPC1-205ENST00000518196 ITGA3P26006 1051 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 PSMA6P60900 246 aaKnown RBP12.08□□□□□ -0.48
PABPC1-205ENST00000518196 PHC1P78364 1004 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 MRPS35P82673 323 aaKnown RBP12.08□□□□□ -0.48
PABPC1-205ENST00000518196 MGAT2Q10469 447 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 RCAN2Q14206 197 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 MAPKAPK3Q16644 382 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 TIGD2Q4W5G0 525 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 JMJD6Q6NYC1 403 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-205ENST00000518196 TMEM107Q6UX40 140 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 HSDL2Q6YN16 418 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 RNF111Q6ZNA4 994 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 GK5Q6ZS86 529 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 APLFQ8IW19 511 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-205ENST00000518196 OR4A15Q8NGL6 344 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 SNRNP27Q8WVK2 155 aaKnown RBP12.08□□□□□ -0.48
PABPC1-205ENST00000518196 ELP4Q96EB1 424 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 THOC3Q96J01 351 aaKnown RBP12.08□□□□□ -0.48
PABPC1-205ENST00000518196 ITCHQ96J02 903 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 CCDC115Q96NT0 180 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 NUDT9Q9BW91 350 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 SEMA4CQ9C0C4 833 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 OR10A5Q9H207 317 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 DDX18Q9NVP1 670 aaKnown RBP12.08□□□□□ -0.48
PABPC1-205ENST00000518196 TAS2R9Q9NYW1 312 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 ZNF639Q9UID6 485 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 CFL2Q9Y281 166 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 SNX8Q9Y5X2 465 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 KCNMB2Q9Y691 235 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 PCSK5Q92824 1860 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 MED13Q9UHV7 2174 aa12.08□□□□□ -0.48
PABPC1-205ENST00000518196 TRBV11-1A0A0K0K1C0 115 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 A0A1W2PP18 115 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 MASP2O00187 686 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 HRKO00198 91 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 EMC8O43402 210 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 PRAMEF2O60811 474 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 COQ9O75208 318 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 ZFAND5O76080 213 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 ANP32DO95626 131 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 IGKV3-11P04433 115 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 ITGAMP11215 1152 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 S1PR1P21453 382 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 SSTR4P31391 388 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 PTGER1P34995 402 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 MC3RP41968 323 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 CDK9P50750 372 aaKnown RBP12.07□□□□□ -0.48
PABPC1-205ENST00000518196 CCL11P51671 97 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 GPR143P51810 404 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 SLC37A1P57057 533 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 SOX8P57073 446 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 PRR5P85299 388 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 Q0VFX4 171 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 POU4F2Q12837 409 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 SPDYE7PQ495Y7 208 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 VPS26BQ4G0F5 336 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 TRMT12Q53H54 448 aaKnown RBP12.07□□□□□ -0.48
PABPC1-205ENST00000518196 BORAQ6PGQ7 559 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 SLC29A4Q7RTT9 530 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 ANKRD46Q86W74 232 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 CLECL1Q8IZS7 167 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 GALNT16Q8N428 558 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 APCDD1LQ8NCL9 501 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 NUP43Q8NFH3 380 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 OR7G2Q8NG99 324 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 OR52R1Q8NGF1 315 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 OR5L2Q8NGL0 311 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 ELP5Q8TE02 316 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 VPS33AQ96AX1 596 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 MOAP1Q96BY2 351 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 DOCK10Q96BY6 2186 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 MAGED4Q96JG8 741 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 LRRC37BQ96QE4 947 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 PANX1Q96RD7 426 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 SLC25A23Q9BV35 468 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 DEFB126Q9BYW3 111 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 LHPPQ9H008 270 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 MYLK2Q9H1R3 596 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 ARMCX1Q9P291 453 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 PRODH2Q9UF12 536 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 LEF1Q9UJU2 399 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-205ENST00000518196 VPS4AQ9UN37 437 aa12.07□□□□□ -0.48
PABPC1-205ENST00000518196 C19orf53Q9UNZ5 99 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-205ENST00000518196 DMXL2Q8TDJ6 3036 aa12.06□□□□□ -0.48
PABPC1-205ENST00000518196 RFXANKO14593 260 aa12.06□□□□□ -0.48
PABPC1-205ENST00000518196 ANGPT2O15123 496 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms