RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 HIST1H1BP16401 226 aaKnown RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 UGT2B7P16662 529 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 LBPP18428 481 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 IL1RNP18510 177 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 ATF3P18847 181 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PSMA1P25786 263 aaKnown RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SHMT2P34897 504 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MSX2P35548 267 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 LIPAP38571 399 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MNDAP41218 407 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 KIR2DL3P43628 341 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 CDKN1BP46527 198 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 KCNQ1P51787 676 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 RAP1AP62834 184 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 VLDLRP98155 873 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 REEP5Q00765 189 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MYL7Q01449 175 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 DHODHQ02127 395 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 TAP2Q03519 686 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MBTD1Q05BQ5 628 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MAMLD1Q13495 774 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 DPYSL3Q14195 570 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PIGHQ14442 188 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PCLAFQ15004 111 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PEA15Q15121 130 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 LRRC41Q15345 812 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 HMGN3Q15651 99 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 NPY5RQ15761 445 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SNAPC1Q16533 368 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 LGALSLQ3ZCW2 172 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 GLYR1Q49A26 553 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 FLYWCH1Q4VC44 716 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC9B1Q4ZJI4 515 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 AGKQ53H12 422 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PCID2Q5JVF3 399 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 FNBP1LQ5T0N5 605 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 OTUD3Q5T2D3 398 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 HIST2H3PS2Q5TEC6 136 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 YOD1Q5VVQ6 348 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 LIPMQ5VYY2 423 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SAXO2Q658L1 398 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 TAPT1Q6NXT6 567 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MED27Q6P2C8 311 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRSS55Q6UWB4 352 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 OAFQ86UD1 273 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MAML2Q8IZL2 1156 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC44A5Q8NCS7 719 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PXT1Q8NFP0 134 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR4F6Q8NGB9 312 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR2D3Q8NGH3 330 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR52E4Q8NGH9 312 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR4K15Q8NH41 348 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR14A16Q8NHC5 309 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC35B2Q8TB61 432 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PAQR8Q8TEZ7 354 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 CHTF18Q8WVB6 975 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PIH1D2Q8WWB5 315 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 ROBO4Q8WZ75 1007 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 KCNJ9Q92806 393 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MR1Q95460 341 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 UCN3Q969E3 161 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 ORAI1Q96D31 301 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 DNAJC19Q96DA6 116 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 HMCESQ96FZ2 354 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 C1orf159Q96HA4 380 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 DIRAS2Q96HU8 199 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MARK4Q96L34 752 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 FCRL1Q96LA6 429 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MRGPRX4Q96LA9 322 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 S100A13Q99584 98 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 TXN2Q99757 166 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 KATNB1Q9BVA0 655 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SPATA5L1Q9BVQ7 753 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 BEX2Q9BXY8 128 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MRPL4Q9BYD3 311 aaKnown RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRRG3Q9BZD7 231 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 CD244Q9BZW8 370 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SEMA4CQ9C0C4 833 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 EGLN1Q9GZT9 426 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 AP5M1Q9H0R1 490 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 C11orf54Q9H0W9 315 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR52A5Q9H2C5 316 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 RIMS4Q9H426 269 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PCIF1Q9H4Z3 704 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MAGIXQ9H6Y5 334 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 TUBA4BQ9H853 241 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 ANKRA2Q9H9E1 313 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SEPSECSQ9HD40 501 aaKnown RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 TREM1Q9NP99 234 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 IL26Q9NPH9 171 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 SPATA6Q9NWH7 488 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 PARPBPQ9NWS1 579 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 TAS2R3Q9NYW6 316 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 GHRLQ9UBU3 117 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 DNPEPQ9ULA0 475 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 TBX20Q9UMR3 447 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 ADAMTS5Q9UNA0 930 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 MSRB2Q9Y3D2 182 aa4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM184BQ9Y519 407 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P19-201ENST00000517578 RREB1Q92766 1687 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms