RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PPP3R1P63098 170 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 EIF4HQ15056 248 aaKnown RBP10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 WSCD2Q2TBF2 565 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 LINGO2Q7L985 606 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 C6orf120Q7Z4R8 191 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 COQ8BQ96D53 544 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 CTRCQ99895 268 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 CENPOQ9BU64 300 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC46A2Q9BY10 475 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 MMP28Q9H239 520 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 VNN3Q9NY84 501 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 MARK1Q9P0L2 795 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 SCDO00767 359 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 TAPBPO15533 448 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 RNGTTO60942 597 aaKnown RBP10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 JUNDP17535 347 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 STARP49675 285 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 PON3Q15166 354 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 ATAD3CQ5T2N8 411 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 ZCCHC12Q6PEW1 402 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 NAGSQ8N159 534 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 RNF175Q8N4F7 328 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 DENND6BQ8NEG7 585 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 B3GNT7Q8NFL0 401 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 ZNF566Q969W8 418 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 TCEAL4Q96EI5 215 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 CASD1Q96PB1 797 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 GPR174Q9BXC1 333 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 HCN3Q9P1Z3 774 aa10.31□□□□□ -0.76
PCDHGA1-202ENST00000517417 CENPBD1B2RD01 187 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 WASH3PC4AMC7 463 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 ANKRD28O15084 1053 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC16A5O15375 505 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 ORC5O43913 435 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 VEGFDO43915 354 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 RENP00797 406 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 HTR1AP08908 422 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 ADORA3P0DMS8 318 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 IL7P13232 177 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 UQCRC2P22695 453 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 RPS3P23396 243 aaKnown RBP eCLIP10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 UGT2B10P36537 528 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 GMFBP60983 142 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 TSPAN5P62079 268 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 CST6Q15828 149 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 DNAJC22Q8N4W6 341 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 C1orf216Q8TAB5 229 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 PIP5K1AQ99755 562 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 SEC61A2Q9H9S3 476 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 DNAH12Q6ZR08 3092 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 RLFQ13129 1914 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 MCM3APO60318 1980 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 IGLV3-10A0A075B6K4 115 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 TCRBV21S2A2A0A5A6 115 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 PTHP01270 115 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 NUDT7P0C024 238 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 HOXD8P13378 290 aaPredicted RBP10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 ADRB3P13945 408 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 CELP19835 753 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 CRISP1P54107 249 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 TMEM44Q2T9K0 475 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 NXPE4Q6UWF7 544 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC46A3Q7Z3Q1 461 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 COMMD6Q7Z4G1 85 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 SLC39A11Q8N1S5 342 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 MFSD4AQ8N468 514 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 ZNF527Q8NB42 609 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 TESCQ96BS2 214 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 WDR92Q96MX6 357 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 RNF167Q9H6Y7 350 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 PSORS1C1Q9UIG5 152 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 CEP350Q5VT06 3117 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 SCAMP2O15127 329 aaKnown RBP10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 TLX3O43711 291 aaPredicted RBP10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 LATS1O95835 1130 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 CNR2P34972 360 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 RGNQ15493 299 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 SPHARQ15513 63 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 SOWAHCQ53LP3 525 aaPredicted RBP10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 USP53Q70EK8 1073 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 NRARPQ7Z6K4 114 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 ZNF761Q86XN6 746 aaPredicted RBP10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 RASGRP3Q8IV61 690 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 OR51G2Q8NGK0 314 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 OR5P2Q8WZ92 322 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 TRIM2Q9C040 744 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 TAS2R16Q9NYV7 291 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 TMEFF2Q9UIK5 374 aaPredicted RBP10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 A0A1B0GVT2 93 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 ATF6P18850 670 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 ACSL1P33121 698 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 GABRA3P34903 492 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 SIM1P81133 766 aaPredicted RBP10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 VEZF1Q14119 521 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 DECR1Q16698 335 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 TMEM107Q6UX40 140 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 OR7G3Q8NG95 312 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 FKBP10Q96AY3 582 aa10.3□□□□□ -0.76
PCDHGA1-202ENST00000517417 ADAD1Q96M93 576 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms