RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 RPS19P39019 145 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 BUD31P41223 144 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SOX3P41225 446 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC1A3P43003 542 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SSR2P43308 183 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CRYBB2P43320 205 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GPR1P46091 355 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 BDKRB1P46663 353 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR1E2P47887 323 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GIPRP48546 466 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CCT3P49368 545 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RNF144AP50876 292 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CRYBA2P53672 197 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 AP2S1P53680 142 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 EPHA4P54764 986 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CDH11P55287 796 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CLDN20P56880 219 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RRAS2P62070 204 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SKP1P63208 163 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CDK5Q00535 292 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CAP1Q01518 475 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RPL6Q02878 288 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 HSF2Q03933 536 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 HSPB3Q12988 150 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NOGQ13253 232 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TSTA3Q13630 321 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ELAVL3Q14576 367 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GANABQ14697 944 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC9A5Q14940 896 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SF3B4Q15427 424 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GPR19Q15760 415 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF79Q15937 498 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SSX1Q16384 188 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GPR162Q16538 588 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 DECR1Q16698 335 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TATDN3Q17R31 274 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 WSCD2Q2TBF2 565 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 COL28A1Q2UY09 1125 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CRTC2Q53ET0 693 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SYT14P1Q58G82 188 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 YIF1BQ5BJH7 314 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF628Q5EBL2 1059 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PRSS36Q5K4E3 855 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 COX20Q5RI15 118 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ATAT1Q5SQI0 421 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SNAP47Q5SQN1 464 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C6orf183Q5T699 404 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FAM69AQ5T7M9 428 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LIPKQ5VXJ0 399 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RAET1GQ6H3X3 334 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TYW3Q6IPR3 259 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PYHIN1Q6K0P9 492 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TCTN3Q6NUS6 607 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TMEM220Q6QAJ8 160 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RSPO2Q6UXX9 243 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LIPIQ6XZB0 460 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 Q6ZVU0 165 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ERN2Q76MJ5 926 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF551Q7Z340 670 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C16orf62Q7Z3J2 963 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C6orf120Q7Z4R8 191 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TECPR1Q7Z6L1 1165 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 KIAA0907Q7Z7F0 614 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MRGPREQ86SM8 312 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GALNT10Q86SR1 603 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SAPCD2Q86UD0 394 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LRRTM4Q86VH4 590 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 AMZ2Q86W34 360 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 VRK3Q8IV63 474 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LAX1Q8IWV1 398 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RNF113BQ8IZP6 322 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CMTM8Q8IZV2 173 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CRIPAKQ8N1N5 446 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC39A11Q8N1S5 342 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C10orf111Q8N326 155 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CAMKK1Q8N5S9 505 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MS4A15Q8N5U1 240 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF655Q8N720 491 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TCEANCQ8N8B7 351 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FAM83FQ8NEG4 500 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TMIEQ8NEW7 156 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ANKK1Q8NFD2 765 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR4K5Q8NGD3 323 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR52I1Q8NGK6 324 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR10Q1Q8NGQ4 319 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR2A12Q8NGT7 310 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR5K2Q8NHB8 316 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SUN5Q8TC36 379 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC7A13Q8TCU3 470 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC2A12Q8TD20 617 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 UBASH3BQ8TF42 649 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC38A5Q8WUX1 472 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF480Q8WV37 535 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 APOBEC4Q8WW27 367 aaKnown RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ACOT11Q8WXI4 607 aaPredicted RBP3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RFT1Q96AA3 541 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC22A18Q96BI1 424 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C1GALT1C1Q96EU7 318 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ST6GAL2Q96JF0 529 aa3.19□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LMLNQ96KR4 655 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms