RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 A0A1W2PRG0 241 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 ANKUB1A6NFN9 424 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 CASTOR2A6NHX0 329 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 K7EMT4 169 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 HCRTR2O43614 444 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZNF73O43830 326 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 OR10H3O60404 316 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 PAGE4O60829 102 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 GUCY1B2O75343 617 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 ALDH1L1O75891 902 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 RSL1D1O76021 490 aaKnown RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 IGHV2-70P01814 119 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 PDGFRBP09619 1106 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 U2AF1L5P0DN76 240 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 MAPK4P31152 587 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 ACTR2P61160 394 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 U2AF1Q01081 240 aaKnown RBP eCLIP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 OTUD4Q01804 1114 aaKnown RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 CEBPZQ03701 1054 aaKnown RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 STARD3Q14849 445 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 NFIL3Q16649 462 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 MS4A13Q5J8X5 152 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 WDR78Q5VTH9 848 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 RPUSD3Q6P087 351 aaKnown RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 DHRS11Q6UWP2 260 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 PRSS48Q7RTY5 328 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 C9orf40Q8IXQ3 194 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 TIGD4Q8IY51 512 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 KIR3DL3Q8N743 410 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 LY6G5BQ8NDX9 201 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 NOC3LQ8WTT2 800 aaKnown RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 TMEM41AQ96HV5 264 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 WRAP53Q9BUR4 548 aaKnown RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 NAA15Q9BXJ9 866 aaKnown RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 CDC42EP4Q9H3Q1 356 aaKnown RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 ELL3Q9HB65 397 aaPredicted RBP-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 ADGRL4Q9HBW9 690 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 IL20RAQ9UHF4 553 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 LRCH1Q9Y2L9 728 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 NME7Q9Y5B8 376 aa-1.54□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZNF732B4DXR9 585 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 EIF3CLB5ME19 914 aaKnown RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 MLNRO43193 412 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZSCAN12O43309 604 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 PRC1O43663 620 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 TBL1XO60907 577 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 CSDE1O75534 798 aaKnown RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 MT-ND2P03891 347 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 FHP07954 510 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 IRF2P14316 349 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 PRLRP16471 622 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 MPZP25189 248 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 PPP2R1AP30153 589 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 ADD2P35612 726 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 SLC9A3P48764 834 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 NLRP11P59045 1033 aaKnown RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 TMEM115Q12893 351 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 VEZF1Q14119 521 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 FRG1Q14331 258 aaKnown RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 KCTD2Q14681 263 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZIC1Q15915 447 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 HAGHQ16775 308 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 LRRC37A5PQ49AS3 106 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 UFSP1Q6NVU6 142 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 CLEC17AQ6ZS10 378 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 MFN1Q8IWA4 741 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 CCDC60Q8IWA6 550 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 CNTN4Q8IWV2 1026 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 ELMOD1Q8N336 334 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 NOA1Q8NC60 698 aaKnown RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 OR5W2Q8NH69 310 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZCCHC10Q8TBK6 192 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 RNF139Q8WU17 664 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 RTN4IP1Q8WWV3 396 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZKSCAN4Q969J2 545 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 NEURL3Q96EH8 262 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 C9orf85Q96MD7 179 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 NOL4LQ96MY1 436 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZNF317Q96PQ6 595 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 RNF157Q96PX1 679 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 TAAR1Q96RJ0 339 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 PCDHB18PQ96TA0 734 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 NDNQ99608 321 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 RASL11BQ9BPW5 248 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 UBA5Q9GZZ9 404 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 RNF41Q9H4P4 317 aaPredicted RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 RASSF1Q9NS23 344 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 KLHL28Q9NXS3 571 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 NUFIP1Q9UHK0 495 aaKnown RBP-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 GNPTGQ9UJJ9 305 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 NEUROG3Q9Y4Z2 214 aa-1.55□□□□□ -2.66
RNU6-542P-201ENST00000516405 LRP1BQ9NZR2 4599 aa-1.56□□□□□ -2.66
RNU6-542P-201ENST00000516405 ANK2Q01484 3957 aa-1.56□□□□□ -2.66
RNU6-542P-201ENST00000516405 TUBAL3A6NHL2 446 aa-1.56□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZNF98A6NK75 572 aa-1.56□□□□□ -2.66
RNU6-542P-201ENST00000516405 VSTM5A8MXK1 200 aa-1.56□□□□□ -2.66
RNU6-542P-201ENST00000516405 H3BMM5 538 aa-1.56□□□□□ -2.66
RNU6-542P-201ENST00000516405 CCDC188H7C350 402 aa-1.56□□□□□ -2.66
RNU6-542P-201ENST00000516405 ZNF207O43670 478 aaKnown RBP-1.56□□□□□ -2.66
RNU6-542P-201ENST00000516405 KIF5CO60282 957 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms