RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ZNF551Q7Z340 670 aaPredicted RBP12.9□□□□□ -0.34
USP46-209ENST00000514536 GALNTL5Q7Z4T8 443 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 KRTCAP2Q8N6L1 136 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 OR7G2Q8NG99 324 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 OR7A2PQ8NGA2 310 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 PIWIL2Q8TC59 973 aaKnown RBP12.9□□□□□ -0.34
USP46-209ENST00000514536 SLC22A8Q8TCC7 542 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 ADIPOR1Q96A54 375 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 TMEM125Q96AQ2 219 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 MTERF3Q96E29 417 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 SCMH1Q96GD3 660 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 ZNF764Q96H86 408 aaPredicted RBP12.9□□□□□ -0.34
USP46-209ENST00000514536 AMDHD1Q96NU7 426 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 WDR55Q9H6Y2 383 aaPredicted RBP12.9□□□□□ -0.34
USP46-209ENST00000514536 SLCO1B3Q9NPD5 702 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 DTX4Q9Y2E6 619 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 SCAMP2O15127 329 aaKnown RBP12.9□□□□□ -0.35
USP46-209ENST00000514536 NME6O75414 186 aaPredicted RBP12.9□□□□□ -0.35
USP46-209ENST00000514536 BCAS2O75934 225 aaPredicted RBP12.9□□□□□ -0.35
USP46-209ENST00000514536 RASAL1O95294 804 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 NADKO95544 446 aaPredicted RBP12.9□□□□□ -0.35
USP46-209ENST00000514536 GPX3P22352 226 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 HPCAL1P37235 193 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 EMDP50402 254 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 TMEM64Q6YI46 380 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 MDGA2Q7Z553 956 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 GPALPP1Q8IXQ4 340 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 SLC15A4Q8N697 577 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 ZNF441Q8N8Z8 693 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 TMEM178AQ8NBL3 297 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 GRHL3Q8TE85 626 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 CKAP2Q8WWK9 683 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 TP53INP1Q96A56 240 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 MIB2Q96AX9 1013 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 TAAR6Q96RI8 345 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 ASIC5Q9NY37 505 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 CFL2Q9Y281 166 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 PCDHGB6Q9Y5F9 930 aa12.9□□□□□ -0.35
USP46-209ENST00000514536 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 PLOD3O60568 738 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 LAMP1P11279 417 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 EFNA1P20827 205 aaPredicted RBP12.89□□□□□ -0.35
USP46-209ENST00000514536 PRPS1L1P21108 318 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 EPHA3P29320 983 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 RPL3P39023 403 aaKnown RBP12.89□□□□□ -0.35
USP46-209ENST00000514536 MANFP55145 182 aaKnown RBP12.89□□□□□ -0.35
USP46-209ENST00000514536 CLDN8P56748 225 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 FOXK1P85037 733 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 PMP22Q01453 160 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 SRSF11Q05519 484 aaKnown RBP12.89□□□□□ -0.35
USP46-209ENST00000514536 HSPB3Q12988 150 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 CPTPQ5TA50 214 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 FHL5Q5TD97 284 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 TMEM107Q6UX40 140 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 LYPD8Q6UX82 237 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 LRRC34Q8IZ02 419 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 ERP27Q96DN0 273 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 ELP4Q96EB1 424 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 MAGED4Q96JG8 741 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 C7orf26Q96N11 449 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 PRPF18Q99633 342 aaKnown RBP12.89□□□□□ -0.35
USP46-209ENST00000514536 ITPAQ9BY32 194 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 TIMMDC1Q9NPL8 285 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 PRODH2Q9UF12 536 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 CROCCQ5TZA2 2017 aa12.89□□□□□ -0.35
USP46-209ENST00000514536 BSNQ9UPA5 3926 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 PLOD2O00469 737 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 ZNF195O14628 629 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 NME2P1O60361 137 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 DDX5P17844 614 aaKnown RBP12.88□□□□□ -0.35
USP46-209ENST00000514536 NME2P22392 152 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 GPC1P35052 558 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 MC3RP41968 323 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 INAQ16352 499 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 NNATQ16517 81 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 ZNF791Q3KP31 576 aaPredicted RBP12.88□□□□□ -0.35
USP46-209ENST00000514536 SLC9B1Q4ZJI4 515 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 HSP90B2PQ58FF3 399 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 NXNQ6DKJ4 435 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 OGFOD2Q6N063 350 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 FAM180AQ6UWF9 173 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 RTL4Q6ZR62 310 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 MAVSQ7Z434 540 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.88□□□□□ -0.35
USP46-209ENST00000514536 RIMKLAQ8IXN7 391 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 TAGAPQ8N103 731 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 ZFP28Q8NHY6 868 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 FAR1Q8WVX9 515 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 COQ8BQ96D53 544 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 ZBED6CLQ96FA7 236 aaPredicted RBP12.88□□□□□ -0.35
USP46-209ENST00000514536 MAGEB18Q96M61 343 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 NXF5Q9H1B4 397 aaKnown RBP12.88□□□□□ -0.35
USP46-209ENST00000514536 AGPAT4Q9NRZ5 378 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 C19orf53Q9UNZ5 99 aaPredicted RBP12.88□□□□□ -0.35
USP46-209ENST00000514536 KLF13Q9Y2Y9 288 aaPredicted RBP12.88□□□□□ -0.35
USP46-209ENST00000514536 NPFFR2Q9Y5X5 522 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 USH1CQ9Y6N9 552 aa12.88□□□□□ -0.35
USP46-209ENST00000514536 A0A087WV62 115 aa12.87□□□□□ -0.35
USP46-209ENST00000514536 UPK1AO00322 258 aa12.87□□□□□ -0.35
USP46-209ENST00000514536 PEX1O43933 1283 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms