RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 DDCP20711 480 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 C21orf33P30042 268 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-213ENST00000514442 PIGAP37287 484 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 OMPP47874 163 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 VSX2P58304 361 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-213ENST00000514442 NADSYN1Q6IA69 706 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 SLC46A3Q7Z3Q1 461 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 GPR26Q8NDV2 337 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 TPSD1Q9BZJ3 242 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 PTTG3PQ9NZH4 202 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 IL17CQ9P0M4 197 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 PCTPQ9UKL6 214 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 TMPRSS11EQ9UL52 423 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 PHIPQ8WWQ0 1821 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 OR6C74A6NCV1 312 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 HIDE1A8MVS5 230 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 FAM25EA8MYX2 175 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF879B4DU55 563 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 SLC16A5O15375 505 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 MAGEA12P43365 314 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 CTF1Q16619 201 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 IER5LQ5T953 404 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 OR6K6Q8NGW6 343 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 ERVMER34-1Q9H9K5 563 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 NEUROD4Q9HD90 331 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF451Q9Y4E5 1061 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 SLC16A6O15403 523 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 CH25HO95992 272 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 ASGR2P07307 311 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 PIK3CBP42338 1070 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 TOR2AQ5JU69 321 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 CATSPEREQ5SY80 951 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 OR5M3Q8NGP4 307 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 TSEN15Q8WW01 171 aaKnown RBP12.51□□□□□ -0.41
TCOF1-213ENST00000514442 RBPMSQ93062 196 aaKnown RBP12.51□□□□□ -0.41
TCOF1-213ENST00000514442 CCDC115Q96NT0 180 aa12.51□□□□□ -0.41
TCOF1-213ENST00000514442 H3BQ06 376 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 KHNYNO15037 678 aaKnown RBP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 SSTR4P31391 388 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 CCKBRP32239 447 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 FOXA1P55317 472 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ERVPABLB-1P60509 514 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 RAB5BP61020 215 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 GRIN2CQ14957 1233 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 DUSP7Q16829 419 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 VMACQ2NL98 169 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 FLYWCH1Q4VC44 716 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ARHGAP40Q5TG30 622 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 CD200R1Q8TD46 325 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 TM9SF2Q99805 663 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 NDC1Q9BTX1 674 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 TBL1XR1Q9BZK7 514 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 BIN3Q9NQY0 253 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ZMAT5Q9UDW3 170 aaKnown RBP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ELOA3DA6NLF2 546 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 VEGFDO43915 354 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 PCDHGA12O60330 932 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 TGM6O95932 706 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 JUPP14923 745 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 PFKLP17858 780 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 CD9P21926 228 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 NTSR1P30989 418 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ARRB2P32121 409 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 RRAS2P62070 204 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 TMEM44Q2T9K0 475 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 CTU2Q2VPK5 515 aaKnown RBP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ELOA3BQ3SY89 546 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 GALNT10Q86SR1 603 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 MFSD4AQ8N468 514 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ELOA3Q8NG57 546 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 YIPF6Q96EC8 236 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 CHMP1AQ9HD42 196 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 KDELR2P33947 212 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 PTPRRQ15256 657 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 MPP7Q5T2T1 576 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 RAB12Q6IQ22 244 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 IL17RDQ8NFM7 739 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 DPH2Q9BQC3 489 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 MARCH5Q9NX47 278 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ASB4Q9Y574 426 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 TEX13CA0A0J9YWL9 993 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 PCDH17O14917 1159 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 TIA1P31483 386 aaKnown RBP eCLIP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ARRB1P49407 418 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ISL1P61371 349 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 FAM180BQ6P0A1 224 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 ANKRD53Q8N9V6 530 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 GGHQ92820 318 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 FAM83CQ9BQN1 747 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 DPH7Q9BTV6 452 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 C11orf54Q9H0W9 315 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-213ENST00000514442 NT5DC2Q9H857 520 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 USP22Q9UPT9 525 aa12.5□□□□□ -0.41
TCOF1-213ENST00000514442 WASH4PA8MWX3 477 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 SCO1O75880 301 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 GGT2P36268 569 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 DSC1Q08554 894 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 HSD11B1LQ7Z5J1 315 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 LINC01465Q8N7H1 131 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms