RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR7A17O14581 309 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 ACOX3O15254 700 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 CLDN9O95484 217 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 RAF1P04049 648 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 INHBAP08476 426 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 RHOXF2BP0C7M4 288 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 CPN1P15169 458 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 KRT15P19012 456 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 MASP1P48740 699 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 DCAF7P61962 342 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 PSPHP78330 225 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 RCAN2Q14206 197 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 GLE1Q53GS7 698 aaKnown RBP11.5□□□□□ -0.57
VEGFA-216ENST00000512683 C6orf163Q5TEZ5 329 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 SLC30A6Q6NXT4 461 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 PAMR1Q6UXH9 720 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 MYLK4Q86YV6 388 aaPredicted RBP11.5□□□□□ -0.57
VEGFA-216ENST00000512683 GALNT12Q8IXK2 581 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 ZNF615Q8N8J6 731 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 MNS1Q8NEH6 495 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 TNIP2Q8NFZ5 429 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 WDR20Q8TBZ3 569 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 SREK1Q8WXA9 508 aaKnown RBP11.5□□□□□ -0.57
VEGFA-216ENST00000512683 NRGNQ92686 78 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 ABTB1Q969K4 478 aaPredicted RBP11.5□□□□□ -0.57
VEGFA-216ENST00000512683 ADIPOR1Q96A54 375 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 RILPQ96NA2 401 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 DACH2Q96NX9 599 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 OR10A5Q9H207 317 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 ACBD3Q9H3P7 528 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 JKAMPQ9P055 326 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 PSME2Q9UL46 239 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 CBLCQ9ULV8 474 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 C15orf41Q9Y2V0 281 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 EXPH5Q8NEV8 1989 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 PHF3Q92576 2039 aaKnown RBP11.5□□□□□ -0.57
VEGFA-216ENST00000512683 FREM3P0C091 2139 aa11.5□□□□□ -0.57
VEGFA-216ENST00000512683 NAV3Q8IVL0 2385 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 NINQ8N4C6 2090 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 WASHC1A8K0Z3 465 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 TMPRSS11DO60235 418 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 EEDO75530 441 aaKnown RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 PRKRAO75569 313 aaKnown RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 CBR3O75828 277 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 CLPSP04118 112 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 ABCB1P08183 1280 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 RBP1P09455 135 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 CTAGE8P0CG41 777 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 PORP16435 677 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 HOXB4P17483 251 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 BMP7P18075 431 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 CHMP24386 653 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 TRPC1P48995 793 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 SERPINB9P50453 376 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 XKP51811 444 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 NEK2P51955 445 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 ZNF136P52737 540 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 MAP4K2Q12851 820 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 GAB1Q13480 694 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 CEBPEQ15744 281 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 CPSF6Q16630 551 aaKnown RBP eCLIP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 BIVMQ86UB2 503 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 CTAGE4Q8IX94 777 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 TMEM151AQ8N4L1 468 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 PTGR2Q8N8N7 351 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 NAXEQ8NCW5 288 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 OR52B6Q8NGF0 335 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 UHMK1Q8TAS1 419 aaKnown RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 WDYHV1Q96HA8 205 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 NSUN5Q96P11 429 aaKnown RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 GNRHR2Q96P88 292 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 CDK15Q96Q40 435 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 TM9SF2Q99805 663 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 NTMT1Q9BV86 223 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 NOL11Q9H8H0 719 aaKnown RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 ZBTB26Q9HCK0 441 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 DLL4Q9NR61 685 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 NMRK1Q9NWW6 199 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 ZNF180Q9UJW8 692 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 PCTPQ9UKL6 214 aa11.49□□□□□ -0.57
VEGFA-216ENST00000512683 RPH3AQ9Y2J0 694 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 MRPS18CQ9Y3D5 142 aaKnown RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 PRRC2AP48634 2157 aaKnown RBP11.49□□□□□ -0.57
VEGFA-216ENST00000512683 NIPBLQ6KC79 2804 aaeCLIP11.48□□□□□ -0.576e-6■□□□□ 8.4
VEGFA-216ENST00000512683 GOLGA6L10A6NI86 522 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 TRIM49D1C9J1S8 452 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 POC1B-GALNT4F8VUJ3 575 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 STX16-NPEPL1H3BU86 382 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 STX16O14662 325 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 PGRMC2O15173 223 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 AIFM1O95831 613 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 SBK3P0C264 359 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 COL6A2P12110 1019 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 CPMP14384 443 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 GCAP28676 217 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 FBXW4P57775 412 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 ADAM8P78325 824 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 TRAF3Q13114 568 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 KEAP1Q14145 624 aa11.48□□□□□ -0.57
VEGFA-216ENST00000512683 DEFB113Q30KQ7 82 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms