RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CDYL2Q8N8U2 506 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 FAM13CQ8NE31 585 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 CHDHQ8NE62 594 aaPredicted RBP10.01□□□□□ -0.81
RNF4-212ENST00000509258 ADCY4Q8NFM4 1077 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 NINJ1Q92982 152 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 NTNG2Q96CW9 530 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 SLC6A15Q9H2J7 730 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 ZNF703Q9H7S9 590 aaPredicted RBP10.01□□□□□ -0.81
RNF4-212ENST00000509258 QPCTLQ9NXS2 382 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 CNIH4Q9P003 139 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 ADAM29Q9UKF5 820 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 TMCO1Q9UM00 188 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 PCDHGB3Q9Y5G1 929 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 PCDHA9Q9Y5H5 950 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 IKBKGQ9Y6K9 419 aa10.01□□□□□ -0.81
RNF4-212ENST00000509258 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.01□□□□□ -0.81
RNF4-212ENST00000509258 FAM221AA4D161 298 aa10□□□□□ -0.81
RNF4-212ENST00000509258 UBFD1O14562 309 aaKnown RBP10□□□□□ -0.81
RNF4-212ENST00000509258 DIAPH2O60879 1101 aa10□□□□□ -0.81
RNF4-212ENST00000509258 CBX7O95931 251 aa10□□□□□ -0.81
RNF4-212ENST00000509258 GLI4P10075 376 aa10□□□□□ -0.81
RNF4-212ENST00000509258 PYGBP11216 843 aa10□□□□□ -0.81
RNF4-212ENST00000509258 GPX3P22352 226 aa10□□□□□ -0.81
RNF4-212ENST00000509258 CNTFP26441 200 aa10□□□□□ -0.81
RNF4-212ENST00000509258 PIK3R1P27986 724 aa10□□□□□ -0.81
RNF4-212ENST00000509258 SERPINB3P29508 390 aa10□□□□□ -0.81
RNF4-212ENST00000509258 GALNSP34059 522 aa10□□□□□ -0.81
RNF4-212ENST00000509258 FEN1P39748 380 aaKnown RBP10□□□□□ -0.81
RNF4-212ENST00000509258 MAPK12P53778 367 aa10□□□□□ -0.81
RNF4-212ENST00000509258 FOXA1P55317 472 aa10□□□□□ -0.81
RNF4-212ENST00000509258 WNT3P56703 355 aa10□□□□□ -0.81
RNF4-212ENST00000509258 KCNJ2P63252 427 aa10□□□□□ -0.81
RNF4-212ENST00000509258 RPP38P78345 283 aaKnown RBP10□□□□□ -0.81
RNF4-212ENST00000509258 IFT88Q13099 833 aa10□□□□□ -0.81
RNF4-212ENST00000509258 NTRK2Q16620 822 aa10□□□□□ -0.81
RNF4-212ENST00000509258 PRICKLE4Q2TBC4 344 aa10□□□□□ -0.81
RNF4-212ENST00000509258 CCNYL2Q5T2Q4 361 aa10□□□□□ -0.81
RNF4-212ENST00000509258 C1orf185Q5T7R7 199 aa10□□□□□ -0.81
RNF4-212ENST00000509258 C6orf163Q5TEZ5 329 aa10□□□□□ -0.81
RNF4-212ENST00000509258 SLC48A1Q6P1K1 146 aa10□□□□□ -0.81
RNF4-212ENST00000509258 SEM1Q6ZVN7 128 aa10□□□□□ -0.81
RNF4-212ENST00000509258 TAOK1Q7L7X3 1001 aa10□□□□□ -0.81
RNF4-212ENST00000509258 LIX1LQ8IVB5 337 aa10□□□□□ -0.81
RNF4-212ENST00000509258 TAGAPQ8N103 731 aa10□□□□□ -0.81
RNF4-212ENST00000509258 OR4K14Q8NGD5 310 aa10□□□□□ -0.81
RNF4-212ENST00000509258 SELENOMQ8WWX9 145 aa10□□□□□ -0.81
RNF4-212ENST00000509258 NRGNQ92686 78 aa10□□□□□ -0.81
RNF4-212ENST00000509258 CNRIP1Q96F85 164 aaPredicted RBP10□□□□□ -0.81
RNF4-212ENST00000509258 APIPQ96GX9 242 aa10□□□□□ -0.81
RNF4-212ENST00000509258 POM121Q96HA1 1249 aa10□□□□□ -0.81
RNF4-212ENST00000509258 ZNF681Q96N22 645 aa10□□□□□ -0.81
RNF4-212ENST00000509258 FOXC2Q99958 501 aa10□□□□□ -0.81
RNF4-212ENST00000509258 ACPTQ9BZG2 426 aa10□□□□□ -0.81
RNF4-212ENST00000509258 TSPYL1Q9H0U9 437 aa10□□□□□ -0.81
RNF4-212ENST00000509258 NXF5Q9H1B4 397 aaKnown RBP10□□□□□ -0.81
RNF4-212ENST00000509258 OR10A5Q9H207 317 aa10□□□□□ -0.81
RNF4-212ENST00000509258 GSTO2Q9H4Y5 243 aa10□□□□□ -0.81
RNF4-212ENST00000509258 ELOVL6Q9H5J4 265 aa10□□□□□ -0.81
RNF4-212ENST00000509258 ALKBH4Q9NXW9 302 aa10□□□□□ -0.81
RNF4-212ENST00000509258 MAT2BQ9NZL9 334 aa10□□□□□ -0.81
RNF4-212ENST00000509258 TBK1Q9UHD2 729 aa10□□□□□ -0.81
RNF4-212ENST00000509258 TRPS1Q9UHF7 1281 aa10□□□□□ -0.81
RNF4-212ENST00000509258 L3MBTL1Q9Y468 752 aa10□□□□□ -0.81
RNF4-212ENST00000509258 TIMM22Q9Y584 194 aa10□□□□□ -0.81
RNF4-212ENST00000509258 NAV3Q8IVL0 2385 aa10□□□□□ -0.81
RNF4-212ENST00000509258 ABCA4P78363 2273 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 A0A0G2JNJ9 132 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 C2orf92A0A1B0GVN3 265 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 OR6C76A6NM76 312 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 HSPB2A8KAH6 182 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 C17orf51A8MQB3 221 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 B4DXG7 233 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 G3V2L1 256 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 TP53I11O14683 189 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 TRIM3O75382 744 aaPredicted RBP9.99□□□□□ -0.81
RNF4-212ENST00000509258 CTAG2O75638 210 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 SUPT7LO94864 414 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 OTCP00480 354 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 CD99P14209 185 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 NT5EP21589 574 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 PTGDSP41222 190 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 TRPC1P48995 793 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 TMED10P49755 219 aaKnown RBP9.99□□□□□ -0.81
RNF4-212ENST00000509258 IST1P53990 364 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 MRPS35P82673 323 aaKnown RBP9.99□□□□□ -0.81
RNF4-212ENST00000509258 HMGCS1Q01581 520 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 HSPB2Q16082 182 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 TRMT12Q53H54 448 aaKnown RBP9.99□□□□□ -0.81
RNF4-212ENST00000509258 RIPPLY2Q5TAB7 128 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 HLA-DQA1Q5Y7H0 255 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 TRMT10CQ7L0Y3 403 aaKnown RBP9.99□□□□□ -0.81
RNF4-212ENST00000509258 WDR53Q7Z5U6 358 aaPredicted RBP9.99□□□□□ -0.81
RNF4-212ENST00000509258 GALNT12Q8IXK2 581 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 LRRC25Q8N386 305 aaPredicted RBP9.99□□□□□ -0.81
RNF4-212ENST00000509258 KIF18AQ8NI77 898 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 C11orf24Q96F05 449 aaPredicted RBP9.99□□□□□ -0.81
RNF4-212ENST00000509258 ZNF382Q96SR6 550 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 TMUB1Q9BVT8 246 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 ITPAQ9BY32 194 aa9.99□□□□□ -0.81
RNF4-212ENST00000509258 CXXC4Q9H2H0 198 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms