RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SH2D4BQ5SQS7 431 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 Q6ZRM9 215 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZCCHC23Q6ZST2 131 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 RPS27LQ71UM5 84 aaKnown RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 CRLF3Q8IUI8 442 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 PLD3Q8IV08 490 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 FAM9CQ8IZT9 166 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 DSELQ8IZU8 1212 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZCCHC7Q8N3Z6 543 aaKnown RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 NLGN4YQ8NFZ3 816 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MDM1Q8TC05 714 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 UTP15Q8TED0 518 aaKnown RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 FGF11Q92914 225 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 NACC2Q96BF6 587 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 PPP3R2Q96LZ3 170 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 GBP5Q96PP8 586 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR1F2PQ96R84 312 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 SERINC2Q96SA4 455 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 SORT1Q99523 831 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MTERF1Q99551 399 aaKnown RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 DPH1Q9BZG8 443 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 ULBP3Q9BZM4 244 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 SHCBP1LQ9BZQ2 653 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 SPRTNQ9H040 489 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 SLC26A1Q9H2B4 701 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 DDX31Q9H8H2 851 aaKnown RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 COPS7BQ9H9Q2 264 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF304Q9HCX3 659 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 LYRM4Q9HD34 91 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 APMAPQ9HDC9 416 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MLXIPLQ9NP71 852 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MKKSQ9NPJ1 570 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 LHX9Q9NQ69 397 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MRGBPQ9NV56 204 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 C14orf105Q9NVL8 296 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MS4A12Q9NXJ0 267 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZDHHC2Q9UIJ5 367 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 KCND3Q9UK17 655 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 KLK13Q9UKR3 277 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 MRPS33Q9Y291 106 aaKnown RBP5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 PADI2Q9Y2J8 665 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 SPACA6W5XKT8 324 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 WDFY3Q8IZQ1 3526 aa5.17□□□□□ -1.58
HMGB1P44-201ENST00000508597 CCDC88CQ9P219 2028 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 IGLV3-12A0A075B6K2 115 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 ARHGAP10A1A4S6 786 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 C9J4A7 227 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 HDAC3O15379 428 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 P2RX6O15547 441 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 ERI3O43414 337 aaKnown RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 ITM2AO43736 263 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 RAD1O60671 282 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 GALR3O60755 368 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 TBX6O95947 436 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 IGHEP01854 428 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 AMY1AP04745 511 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 CHRNGP07510 517 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 DDX5P17844 614 aaKnown RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 FBLP22087 321 aaKnown RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 HIST1H1TP22492 207 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 JAK1P23458 1154 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 TLX1P31314 330 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 MDH1P40925 334 aaKnown RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 CLDN6P56747 220 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 RPS13P62277 151 aaKnown RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 RPS15P62841 145 aaKnown RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 CYP4F2P78329 520 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 MC1RQ01726 317 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 OCA2Q04671 838 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 ACSM2AQ08AH3 577 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 DDX39BQ13838 428 aaKnown RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 ABRAXAS2Q15018 415 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 IMPG1Q17R60 797 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 HKDC1Q2TB90 917 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 ATP6AP1LQ52LC2 224 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 C1QL3Q5VWW1 255 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 ACSM2BQ68CK6 577 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR4C11Q6IEV9 310 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 MTERF4Q7Z6M4 381 aaKnown RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 NUDT13Q86X67 352 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 CACNA2D3Q8IZS8 1091 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 METTL4Q8N3J2 472 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF781Q8N8C0 355 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF248Q8NDW4 579 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 IL17DQ8TAD2 202 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 TWIST2Q8WVJ9 160 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 KIAA1143Q96AT1 154 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZBTB9Q96C00 473 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 MOCOSQ96EN8 888 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 MMABQ96EY8 250 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 VPS50Q96JG6 964 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 CLPTM1LQ96KA5 538 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 C10orf90Q96M02 699 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 F2RL3Q96RI0 385 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 CTRCQ99895 268 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 C20orf27Q9GZN8 174 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 KLHL31Q9H511 634 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 WDR54Q9H977 334 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 TMEM140Q9NV12 185 aa5.16□□□□□ -1.58
HMGB1P44-201ENST00000508597 C1orf109Q9NX04 203 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms