RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 SLAMF7Q9NQ25 335 aa18.67■□□□□ 0.58
USP53-203ENST00000507597 PCDHGA9Q9Y5G4 932 aaKnown RBP18.67■□□□□ 0.58
USP53-203ENST00000507597 A6NL46 340 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 BBIP1A8MTZ0 92 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 ABCB1P08183 1280 aaPredicted RBP18.66■□□□□ 0.58
USP53-203ENST00000507597 CT62P0C5K7 136 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 ITGAMP11215 1152 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 UQCRC2P22695 453 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 SOAT1P35610 550 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 MC3RP41968 323 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 ANXA11P50995 505 aaKnown RBP18.66■□□□□ 0.58
USP53-203ENST00000507597 NRG3P56975 720 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 HBA1P69905 142 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 RNF4P78317 190 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 MRPS35P82673 323 aaKnown RBP18.66■□□□□ 0.58
USP53-203ENST00000507597 TXNL4AP83876 142 aaKnown RBP18.66■□□□□ 0.58
USP53-203ENST00000507597 MGAT2Q10469 447 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 CYLC2Q14093 348 aaPredicted RBP18.66■□□□□ 0.58
USP53-203ENST00000507597 C6orf10Q5SRN2 563 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 RPS19BP1Q86WX3 136 aaKnown RBP18.66■□□□□ 0.58
USP53-203ENST00000507597 FUNDC1Q8IVP5 155 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 TAGAPQ8N103 731 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 OR2L13Q8N349 312 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 C17orf47Q8NEP4 570 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 GOT1L1Q8NHS2 421 aaPredicted RBP18.66■□□□□ 0.58
USP53-203ENST00000507597 TP53INP1Q96A56 240 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 CMTM5Q96DZ9 223 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 LMF1Q96S06 567 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 MESP1Q9BRJ9 268 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 ZCCHC3Q9NUD5 404 aaKnown RBP18.66■□□□□ 0.58
USP53-203ENST00000507597 NTMQ9P121 344 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 CROCCQ5TZA2 2017 aa18.66■□□□□ 0.58
USP53-203ENST00000507597 CAPN14A8MX76 684 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 SCN2BO60939 215 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 ERN1O75460 977 aaKnown RBP18.65■□□□□ 0.58
USP53-203ENST00000507597 S1PR1P21453 382 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 SSTR4P31391 388 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 CASRP41180 1078 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 PRKAG1P54619 331 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 H3F3CQ6NXT2 135 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 ISLR2Q6UXK2 745 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 ZNF621Q6ZSS3 439 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 SLC15A4Q8N697 577 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 ZNF615Q8N8J6 731 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 PCYOX1LQ8NBM8 494 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 OR7G2Q8NG99 324 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 RP9Q8TA86 221 aaKnown RBP18.65■□□□□ 0.58
USP53-203ENST00000507597 SLC22A8Q8TCC7 542 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 BRIX1Q8TDN6 353 aaKnown RBP18.65■□□□□ 0.58
USP53-203ENST00000507597 MS4A4EQ96PG1 132 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 ADNPQ9H2P0 1102 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 TUBD1Q9UJT1 453 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 MRTO4Q9UKD2 239 aaKnown RBP18.65■□□□□ 0.58
USP53-203ENST00000507597 FAF1Q9UNN5 650 aaPredicted RBP18.65■□□□□ 0.58
USP53-203ENST00000507597 YARS2Q9Y2Z4 477 aaKnown RBP18.65■□□□□ 0.58
USP53-203ENST00000507597 PCDHGB3Q9Y5G1 929 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 HEMK1Q9Y5R4 338 aaPredicted RBP18.65■□□□□ 0.58
USP53-203ENST00000507597 FREM2Q5SZK8 3169 aa18.65■□□□□ 0.58
USP53-203ENST00000507597 C9JVG2 144 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 UPK1AO00322 258 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 CEACAM4O75871 244 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 KCNH1O95259 989 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 KRT75O95678 551 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 CBX7O95931 251 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 ZCCHC18P0CG32 403 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 EFNA1P20827 205 aaPredicted RBP18.64■□□□□ 0.57
USP53-203ENST00000507597 CHI3L1P36222 383 aaPredicted RBP18.64■□□□□ 0.57
USP53-203ENST00000507597 MAGEA8P43361 318 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 CDK9P50750 372 aaKnown RBP18.64■□□□□ 0.57
USP53-203ENST00000507597 PHC1P78364 1004 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 Q0VFX4 171 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 UBAP2LQ14157 1087 aaKnown RBP18.64■□□□□ 0.57
USP53-203ENST00000507597 EXOSC7Q15024 291 aaKnown RBP18.64■□□□□ 0.57
USP53-203ENST00000507597 COQ5Q5HYK3 327 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 ANKRD46Q86W74 232 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 DND1Q8IYX4 353 aaKnown RBP18.64■□□□□ 0.57
USP53-203ENST00000507597 CLECL1Q8IZS7 167 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 CDRT4Q8N9R6 151 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 C16orf52Q8NHV5 167 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 VPS33AQ96AX1 596 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 RAD21L1Q9H4I0 556 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 CDCP1Q9H5V8 836 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 STMN3Q9NZ72 180 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 ZNF451Q9Y4E5 1061 aa18.64■□□□□ 0.57
USP53-203ENST00000507597 DUXAA6NLW8 204 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 ACOX3O15254 700 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 AGR2O95994 175 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 NPPAP01160 153 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 PPIBP23284 216 aaKnown RBP18.63■□□□□ 0.57
USP53-203ENST00000507597 PRDX6P30041 224 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 PPICP45877 212 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 TMED10P49755 219 aaKnown RBP18.63■□□□□ 0.57
USP53-203ENST00000507597 POLE2P56282 527 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 ZNF155Q12901 538 aaPredicted RBP18.63■□□□□ 0.57
USP53-203ENST00000507597 EBPQ15125 230 aaKnown RBP18.63■□□□□ 0.57
USP53-203ENST00000507597 COL28A1Q2UY09 1125 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 ACER2Q5QJU3 275 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 FHL5Q5TD97 284 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 C19orf48Q6RUI8 117 aa18.63■□□□□ 0.57
USP53-203ENST00000507597 GK5Q6ZS86 529 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms